Oncorhynchus mykiss (rainbow trout): 110491185
Help
Entry
110491185 CDS
T07259
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110491185
03036 Chromosome and associated proteins [BR:
omy03036
]
110491185
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
110491185
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
110491185
COMPASS/SET1 complex (yeast)
110491185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
110491185
NCBI-ProteinID:
XP_036803597
Ensembl:
ENSOMYG00000011222
UniProt:
A0A8K9X4S3
LinkDB
All DBs
Position
16:71381355..71411013
Genome browser
AA seq
653 aa
AA seq
DB search
MDSHSEVSDLNPAPGPDRPVGPMMEGGNAPVYCVCRRPDINCFMIGCDCCNEWFHGDCIG
ISEKAAKVIRVWYCEKCRAKDGTLEIKYRPKKTKEKTEKETGDQGKKETGDQEKKETGDQ
EKKETGDQEKKETGDQEKKETGDQEKTETGDQEKTEKETGDQEKTEKQHHTPDLNIEHRR
GSRVKRSARMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRLRQCDVRARKMLRV
KDEEFALSGRGARGSLRRGGPLFDDYSENEMELYQQYKAAGYEDNNMPWHSDDEEAAFDP
VQRKRAVKVKHVKRREKRWDKKDKKEVRRHKQKLKHRERLKHSERGGGGGGEARGDSGGG
GGGMRQCLGPGCVEVARAGSKYCSEDCGMKLATNRIYEILPQRIQQWQQSPCIAEEQGKK
LLERIRRDQQSARLRLTDMEKRFHELEGIIAKAKQQVVQQDEEVNEAEGDTDTDLQIFCV
SCSHPVNPKVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQV
LCPEHSRDPKVTVDEVCGCPLVRDVFQPTGEYCRVSKRKCNKHYCWEKLRRAEVDLERVR
VWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPVTTDLRTAKDRGLDR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcacagtgaggtatcagacctcaacccagcccctggccctgacagacctgta
ggacccatgatggaggggggaaacgcacctgtctactgtgtctgtcgcagacctgacatc
aactgcttcatgattggttgtgactgctgtaacgagtggtttcatggtgactgcatcggc
atatcagagaaggcagctaaagtcatccgggtgtggtactgtgagaaatgtcgtgccaaa
gacgggaccctggagataaagtatcgtcccaagaagaccaaggagaagacggagaaggag
acgggagatcaggggaagaaggagacgggagaccaggagaagaaggagacgggagaccag
gagaagaaggagacgggagaccaggagaagaaggagacgggagaccaggagaaaaaggag
acgggagaccaggagaagacggagacgggagaccaggagaagacggagaaggagacggga
gaccaggagaagacggagaagcagcatcacactccagacctgaatatagaacaccgccga
ggttcacgggtgaagcgttcggcccgtatgtgtggagagtgtgagccgtgcaggaggact
gaggactgtgctcagtgtgatttctgtaaagacatgaagaagtttggaggacccaataag
atcagacagaagtgcaggctccggcagtgtgacgttcgagctcggaaaatgcttcgtgta
aaagatgaggagtttgccctgtctggtcggggggccagagggagtctgagaagagggggg
cctctgtttgatgactacagtgagaatgagatggagctctaccagcagtacaaggctgca
ggctacgaggataacaatatgccatggcatagtgatgatgaggaagcggcctttgacccc
gtgcagcggaagagggctgtgaaggtcaagcacgtcaagagacgagagaagagatgggac
aagaaggacaagaaggaggtgcgtcgccacaagcagaagctgaagcaccgtgagcgactg
aagcacagtgagaggggtggcgggggcggcggcgaggctcggggggacagtggtggagga
ggaggggggatgagacagtgtttgggaccagggtgtgtggaggtcgccagggccggctcc
aaatactgctcagaggactgcggcatgaaactggctaccaatcgtatctatgagatcttg
cctcagaggatacagcagtggcagcagtctccctgtatagctgaggagcagggcaagaag
ctgctggagcgaatcaggagagatcagcagtcagcccgcctgagactcacggacatggag
aaacgcttccacgagctggaggggatcatcgccaaggctaagcaacaggtggtgcaacag
gacgaagaggtgaatgaggcagagggggacacagatacagacctgcagatattctgcgtg
tcctgcagtcaccccgtcaaccccaaggtggcgctaagacacatggagagatgctacgct
aagtacgagagccagacctccttcggctccatgtaccccacacgcatcgaaggtgcaacc
agactgttctgtgacgtatacaaccctcagagtaaaacctactgtaagagactgcaggtg
ttgtgtcctgaacactctagagaccctaaggttactgtggacgaggtgtgtggctgtccc
ctggtgagagacgtcttccagcccacaggagagtactgccgggtgtcgaagcgcaagtgt
aacaagcattactgctgggagaaactgaggagggctgaggtggacctggagagagtccga
gtgtggtacaagctggacgagctctttgagcaggagaggaacgtccgaacagccatgacc
aatagagcaggtctcctggccctcatgctgcaccagaccatccagcacgaccctgttacc
accgacctccgcaccgccaaggataggggattggacagatga
DBGET
integrated database retrieval system
