Oncorhynchus mykiss (rainbow trout): 110491362
Help
Entry
110491362 CDS
T07259
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12
KO
K22614
NLR family CARD domain-containing protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
110491362
Pattern recognition receptors [BR:
omy04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110491362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PYRIN
PRY
NOD2_WH
LRR_6
SPRY
Motif
Other DBs
NCBI-GeneID:
110491362
NCBI-ProteinID:
XP_021420422
Ensembl:
ENSOMYG00000007388
UniProt:
A0A8C7NZ71
LinkDB
All DBs
Position
16:complement(12274901..12280372)
Genome browser
AA seq
1131 aa
AA seq
DB search
MATSVPDLLLAILEELVGNDLKTFHWYLAQSVPDGFPLIPKGHLENADRQDTVDTMVNTY
GHDVAMKISLEILRKMNQKDLSKTLTVDQQEAEVEVAAASIRVPDSPVYITCTAQTGGHV
VAPSLSGCHIGGPVHFNIRVNSLDEDPIVPSQASPAHFTMFPPEPENTEDNDERIESCQK
KLKRNLHSRFVSVFEGLASHGNRKLLNQIYTELYITEAGSTEVNSEHEVRQIETASRRTA
IQETPIQCNDIFQPFLDQSIRTVLTKGVAGIGKTVSVHKFILDWADGKANQNLQLIFPLS
FRELNLVRKKQCSLIELLNGFFTETKETEISNYDNYQVLFVFDGLDECRLPLDFQNNDIL
FKITESTSVDVLLTNLIKGNLLPSAQLWVTTRPAAANQIPPECVDKVTEVRGFNDPQKEE
YFRNRISDENLASRIITHIKTSRSLYIMCHIPVFCWISAIVLERKLEKAGSGEMPKTLTQ
MYSHFLAFQEKDMDLRLQGRGTTDPDWMRKSIMSLGKLAFQQLEKGNLIFYEEDLRECGI
HIGQASVYSGVCTEIFSEELTLCQGKVFCFVHLSIQEFLAALYVFLTFINDNVNLLAKQQ
SFLRRFPFGNSSSTSFYKAAVDKALQSEHGHLDLFLRFLLGLSLESNQILLRGLLTQKTS
RSQTNKESVKYVKEKIKENPSPERCINLFHCLNELHDHSLVEEIQSYLGSGTLSRAKLSP
AQWSALVFVLLTSEEELDEFELKKYSRSEEGLLRLLPVVKASRTALLNRCKLTERCCEAL
ASALSSHSSHQRELDLSHNDLQDSGVKLLSAGLASPQCKLETLRLRRCKLTERCCEALAS
ALSSNSSHMRELDLSDNNLQDSGVMLLSAGLGNPHCKLEVVRLSLCSVTEEGCALLASSL
NSNPSHLRELDLSYNYPGDSGVKLLNAVLEDPHCQLEKLSVECCAEFRIRPGPQRYACEL
TLDPNTAHKELSLSEENRKVTRGKEQPFPDHPERFDYWRQVLCREGLDGRCYWEAECSGR
ALMGVSYRGISRRGEGHDCWLGRNAVSWSLNCSNDSYTAWHNDKSTGITTPSVSNRVGVY
LDWPAGTLSFYSVSSNTLTHLHTFHSTFTEPLYPGFRLGWVDSSVSLCQVE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatctgttcctgacctgctactggctattctagaggagctggtaggaaacgat
ctgaagacatttcactggtacctggctcagagtgtaccagatggctttcctctcatcccc
aagggccatctggagaacgctgacaggcaggacaccgtggatacgatggtgaacacctac
ggccacgatgtagctatgaagatctcactggagatcctgaggaagatgaaccagaaggac
ctcagcaagacgttaacagtggatcagcaagaggctgaggttgaggtagcagctgcctca
attcgggttccagactctcctgtctacatcacttgtacagctcagactggcggccatgtt
gtggccccttcgctctccggctgccatatcggtggtccagttcacttcaacatcagagtc
aactcattagacgaagatcccatagttccatctcaagcttcacctgcccattttaccatg
tttccacctgaacctgagaatacagaagacaatgatgaacgaatcgagagttgtcaaaag
aaactcaaacgcaatctgcacagtaggttcgtcagtgtgtttgagggactggccagccac
gggaacagaaaacttctcaaccagatctacacagagctctacatcacagaggctggaagt
actgaggtcaatagtgaacatgaggtgagacagattgagacggcatccagaagaacagcc
atacaagaaacaccaatccaatgcaacgacatctttcagcccttccttgatcaatccatc
agaactgtgctgacgaagggagtcgctggcatcgggaaaaccgtctcagtgcataagttc
attctggactgggcagatggaaaagccaatcaaaatctccagttgatattccctctttca
tttcgagagctgaatttggtcagaaagaaacaatgcagtttgatcgaacttctcaatggc
ttttttacggaaacaaaagaaaccgagatatcaaactacgacaattatcaggtgctgttt
gtctttgatggtctggatgagtgtcgacttcctctagacttccagaacaatgacattctg
tttaaaataactgagtcaacctcagtggatgtgctgctaacgaacctcatcaaggggaat
ctgcttccctccgctcaactttgggtaaccacccgacctgcagcagccaatcaaatccct
cctgagtgtgttgacaaggtgacagaggtaagagggttcaatgacccacagaaggaagag
tacttcagaaatagaatcagcgatgagaacctggccagcagaatcatcacacacataaag
acatcaagaagcctctacatcatgtgccacattcccgtcttctgttggatctcggccatt
gttctggagagaaagctggagaaagcagggagtggagagatgccaaagaccctgactcag
atgtactcacacttcctggcttttcaggagaaagacatggatctcaggcttcagggaaga
ggaacaactgaccctgactggatgagaaagagcatcatgtccctgggaaagctggctttc
caacaactggagaaaggcaacctgatcttctatgaggaagacctgagagagtgtggcata
cacatcggccaggcatcggtgtactcaggagtgtgtactgagatcttcagtgaggaactg
accttatgccagggaaaggtgttctgctttgttcatctcagtattcaggagtttctggct
gccctgtatgtgtttctcacattcatcaacgacaacgtgaatctattagccaaacagcaa
tcatttctgagacgttttccattcggaaattcatcctcaaccagcttctacaaagcagca
gttgacaaggccttacagagtgagcatggacacctggacctgttcctccgcttccttctg
ggcctctcactggagtccaatcagattctcctacgaggcttgctaactcagaaaacaagt
agatcacagaccaacaaggaatcagtcaagtacgtgaaggagaagatcaaggagaatccc
tctccagagagatgcatcaatctgttccactgtctgaatgaactgcatgaccattctcta
gtggaggagatccaaagctacctgggctcaggaactctctctagggccaaactctcacct
gcacagtggtcagctctggtctttgtgttgctgacttcagaagaggagctggatgagttt
gagctgaagaaatactccagatcagaggagggtcttctgagactgctgccagtggtcaaa
gcctccagaacagccctactgaatcgatgcaaactcacagagagatgctgtgaagcgttg
gcctcagcactcagctcacactcctcacaccagagagagctggacctgagtcacaacgac
ctacaggattcaggagtgaagcttctctctgctggactggcaagtccacagtgtaaactg
gaaacgttaagactgaggcgatgcaaactcacagaaagatgctgtgaagcgttggcctca
gctctcagctcaaactcttcacacatgagagagctggacctgagtgacaacaacctgcag
gattcaggagtcatgctgctctcggcaggactgggcaatccgcactgtaaactggaggtt
gtaaggttgtcactttgtagtgtcacagaggaaggctgtgctttgctagcctcctctctc
aattccaacccctcacacctgagagagctggacttgagctataattacccaggagactcg
ggagtgaagcttctcaatgctgtactggaagatccacactgtcaacttgagaaacttagt
gtggagtgctgtgctgagttcaggatcagaccaggaccacagagatatgcctgtgaactc
acactggacccaaacacagcacacaaagagctctcgctgtctgaggagaacaggaaggtg
acgcgagggaaagagcagccgtttcctgatcacccagagagatttgactactggaggcag
gtgctgtgtcgggaaggtctggatgggcgctgctattgggaggcagagtgtagtgggagg
gccctgatgggagtatcttacagagggatcagcaggagaggagagggacatgactgctgg
ttgggacgaaacgctgtgtcctggagtctgaactgctctaatgacagttacacagcctgg
cacaacgacaagagcactggcataaccaccccctctgtctctaacagagtaggagtgtat
ctggactggccggccggcactctgtccttctacagtgtctcctctaacacactgacccac
ctgcacacgttccactccacgttcactgagcccctctatccagggtttaggctaggctgg
gtggactcgtccgtgtccttgtgtcaggtagaatag
DBGET
integrated database retrieval system
