Oncorhynchus mykiss (rainbow trout): 110491457
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Entry
110491457 CDS
T07259
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110491457
03015 mRNA surveillance pathway
110491457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110491457
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110491457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_3
RRM_occluded
Nup35_RRM_2
KdpD
PI3K_1B_p101
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
110491457
NCBI-ProteinID:
XP_021420599
Ensembl:
ENSOMYG00000033822
LinkDB
All DBs
Position
16:complement(16728503..16733104)
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AA seq
278 aa
AA seq
DB search
MAPSPVRRKEHMDDKAKVREKEKTGATKEKAEKDRGREKGRKRRSSTGSSRSSSSSSSGS
SSGSSSGSSSSSASSRSGSSSSRSSSSTSSGSPSPSRRRHDNHRRSRSKSKSSVKKDDKE
RRKRSPSPRPTKVYLGRLTRNVVKEHIQEIFSSYGKIKMIDMPVDRLRSHLSKGYAYVEF
ENADEAEKALKHMDGGQIDGQEITATAVLAPRVICPPPRRPSPPRRMPPPPPMWRRTPPR
LRRRSRSPRRRSPVRRRTRSRSPGRRRHRSRSSSNSSR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttctccagtgaggaggaaggagcatatggatgacaaggcaaaagtgcgagag
aaggagaaaacgggtgccaccaaggagaaagctgagaaggacaggggaagggagaaggga
cgcaagcgacgtagctccactgggagcagcaggtccagctccagtagcagctctggctcc
agctccggttcttccagcggctccagttcctcctctgcctcaagccgctccgggtcttcc
agctcccgatcttctagctcaaccagctccgggtcgcccagccccagtcgccgccgccac
gacaaccaccgccgctcacggtccaaatccaagtcatcagtgaaaaaggatgacaaggag
aggcgtaagaggagccccagcccccgaccaaccaaggtgtacctgggccgcctcaccaga
aacgttgtcaaggaacacatccaggagatcttcagctcctatggcaaaatcaagatgatt
gacatgcctgtggacaggctccgctcacacttgtcaaagggctacgcctacgtggagttt
gagaatgccgatgaggccgagaaggctcttaaacacatggatggaggccagattgacgga
caggagatcacagccactgccgtgctggctcctagggtaatatgcccgccccctcgcagg
ccctccccccctcgcaggatgcccccaccacccccgatgtggcgacgcacccctccacgc
ctgaggagaaggtctcggtcaccacggagacgctctccggttcgccgcaggactcgttcg
cgctcacccggtcgcagacgccaccgctcacgctccagctccaattcctcccggtag
DBGET
integrated database retrieval system
