Oncorhynchus mykiss (rainbow trout): 110491512
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Entry
110491512 CDS
T07259
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110491512 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110491512 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110491512 (snf8)
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
110491512 (snf8)
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110491512 (snf8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
MarR_2
AbiEi_4
CDK5RAP3
MarR
DUF4896
Motif
Other DBs
NCBI-GeneID:
110491512
NCBI-ProteinID:
XP_021420693
Ensembl:
ENSOMYG00000043726
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All DBs
Position
16:complement(18595651..18603129)
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AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRK
SSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHHRVLKGRGKFAQDVSQDDLVRAIKKLKVMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVSVSEIRESLKWERERACHVLDHLLKEGLAWLDSQASGEPQYWLPALF
SELTSRDVTPEEANQITP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcataggagaggagtaggtgcgggagctatcgccaaaaagaagcttgcagaggccaag
tataaagagagggggacagtgttagctgaggatcaaattgttcagatgtcaaaacagctg
gagaccttcaaatctaaccttgaggaatttgccagcaagcacaaacaagagattcgtaag
agttcccagttccgggtccagtttcaggagatgtgtgccaccattggagttgacccactt
gcctctggcaaaggcttttggtctgagatgcttggcgtgggtgacttctattacgagctg
ggtgtgcagatcattgaagtatgcctggcactgaaacacagaaatggaggacttattacc
ctggacgaactgcatcacagagtgttgaagggaagggggaaatttgctcaggatgtgagc
caagatgacttggtgcgggccataaagaagctgaaagtcatggggaacggctttgggatg
attcctgttggaggctcttacctcgtgcagtcagtgccagcagagctcaacatggaccac
actgtggtacttcagctggctgagaagaagggctacgtttcagtgagtgagatcagagag
agtcttaagtgggagcgagagcgagcctgtcatgtgctggatcacctattgaaagagggc
ttggcgtggttggattcccaagcttctggagagccacagtattggctgccagccctcttt
tctgagctgacttcccgtgatgtcacacctgaggaggccaatcagataacgccttaa
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