Oncorhynchus mykiss (rainbow trout): 110491721
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Entry
110491721 CDS
T07259
Symbol
arhgap23b
Name
(RefSeq) rho GTPase-activating protein 23 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110491721 (arhgap23b)
Membrane trafficking [BR:
omy04131
]
Endosome - Golgi transport
Others
Others
110491721 (arhgap23b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
110491721 (arhgap23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ_6
PH
PH_9
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
110491721
NCBI-ProteinID:
XP_036802495
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All DBs
Position
16:25631211..25702729
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AA seq
1624 aa
AA seq
DB search
MNGVTFCLVGIPPRSGNEAKGRNDGALSSNENTRSLSSGEVEGVAWQGPRTVLLQKNSQG
FGFTLRHFIVYPPESSLHNNLKDEENGNGNGKGCQRGRLEPMDTIFVKSVREKSPAHQAG
LCTGDRLVKVNGESVLGKTYSQVIALIQNSENVLELCIMPKDEDVLQLVSAYSQDAYLRG
NEPYTGGAQHIPDPPPLCYPRAKPTSTAPLPPNHQSPLDNWHCRPSPVNQASSLDNRSAA
VNVTQTSGRPRGPGENEEDGGGHFSSSAGQEGDWLPSLGQNRGRSSSAVSALDFHFANHN
AAIASATLPHMPARKGSLPATRAHSDAMCHQALSDWYYSQAEAAERMSPRHRSISQDRLA
ELGLGLALGPGGAGGAGSNSMSSMAHRDHGVSQETLLLHHQAAAASHDSYWLGGWGGVSG
PGSRSCSESLLAAYASYERNYGRSQETLAQAAALVSPHCERAPAWPSQGAKEQDKDLGNH
HTVTATTAATLATAPSVGRQTQQQQVAEPQTQSRRLEEEELVGYKSYSPSFCRKASHLLQ
QAHSFREPTYIGPHLNWAPSAKTSPSDCEGGWIGGGVVVPRPSSTPAVIPSSSEDERVLG
EERGESRETLSPLPLGQEVVLRQKPPMGRRTPVQALRHPLYALPVDSAEPPVGLLPSPNN
PTAGTPSPVSGGTRMGDSLRRPNGSLQPHHSTPDSLASIPFIDDPISPSADLRARHVPAC
SVVSSSSAPCPLVSSLPCALTSSTTTVSPVTLSSSTSPLVKLRSQDSSSIKSRRSSYLLA
ITTERSKSCDEGLNTFREEGRVFSRLPKRVKSFFTDGSLESLRAAEEARSKRHSTSELGT
ITFSDVRKDGWLHYKQILTEKGKKVGGGMRPWKHVFSVLRSHCLLLYKDKREAVLHGAGA
GPGHGEDEHPPISIRGCLIDIAYSETKRKHTLRLTTQDFCEYLLQAEDRDDMLGWIRVIR
ENSKTDNEELGFSRQALISKKLNDYRKQTTTGNKPDTSPRAHRMMPPFLLAKTDNAFMNR
SSSKDESKGPWGIIMKKAKKTGPKVFGVRLEDCQPAVNNKFVPLIVELCCGLVESMGLEY
TGVYRVPGNNAMVSNLQEQLNRGLEINITEERWQDLNVISSLLKSFFRKLPEPLFTDDKY
NDFIDANRLEDSGNRLKSMKKLIHDLPDHYHHTLKFLVCHLKTVADHADKNKMEPRNLAL
VFGPTLVRTSEDNMTDMVTHMPDRYKIIETLILHHDWFFSDGEVDKDEKAPVDIKRDMQP
VPNIDHLLSNIGRTGLPGSEASDSTTSDSPKDKKCTWGSKKDLSARDFLPLSIISAVTRK
RKIRPISRPLSSSTDEDSEHEPIKASNYGVGGGAKEDEEEGVGKGCAPNGTEEVEEKGEE
ECRKRIEAKQQSDRGREKEGEGKKEGSAWAKDKGVASPKPHPNSFLYTHYQPTTTSPSPP
VEPSVSPHSKLPGLARGRSTVPSWLSPSRQPGSIQPYNTQKTQQPQLEQQPLPVQYRKTR
GGRARPQSMNLDMVMGKGEGEGGVGRRGDRVKVVRATTEVQRHRSSSVGVPQGCVVASLK
VQRSSRLASALAPSPVSFSPPLPSSSFSPSWTDQGSLGSTVVKRRSALEPRDKRKAWRRH
TVVV
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttaccttttgcctggttggaattccacctcgctctggaaacgaagctaaa
gggcggaatgatggcgccctgtcatccaatgagaacactcggtcgctgtcgtcgggcgag
gttgagggcgtggcgtggcagggccctcgtacggtgctcctgcagaagaactcccagggc
ttcggcttcacgctgcgccacttcattgtgtacccgccagagtcctccctccacaataac
ctcaaggatgaggagaatggaaacggcaacggaaaaggttgtcaaaggggtcgtctggag
cccatggacaccatctttgtaaagagtgtgagggagaaaagccccgcccaccaagctggc
ctgtgtacaggggacagactggtaaaggtgaatggggaaagtgtattagggaagacctac
tctcaggtgatcgcgttgatccagaacagcgagaatgttctggagctctgcatcatgcca
aaagatgaggatgtgttgcagttggtaagtgcgtactctcaggatgcctacctgagagga
aatgagccatacacgggaggggcgcagcatatccccgaccctcccccactctgctacccc
cgtgccaagcccacttccacggcccctctgccacccaaccaccaaagccccctggacaac
tggcactgccgccccagccctgttaaccaggcatcctccttggacaaccgctctgccgcg
gttaacgtaactcagacctccggcaggcccaggggtccgggagaaaacgaggaggatggc
ggaggccattttagctcctcggcaggacaagagggagattggctgccatctttggggcag
aaccgcgggcgctcgtcgtcggctgtcagcgcactggatttccactttgccaaccacaac
gccgccatcgcctctgcaaccctgccccacatgcccgcccggaagggaagtttaccggct
acgcgtgcccacagcgacgccatgtgccaccaggcgctgtcggactggtactacagccag
gcagaggcggccgagcgcatgtcccctcgacaccggagcatttcccaggatcggttagcc
gagctggggttgggcttagcgctggggcctggtggcgctggaggtgcggggtctaactct
atgtcctccatggctcacagagaccacggcgtttcccaagaaactctgctgctccaccac
caggcagcagccgcctcccacgattcctattggctgggaggctggggaggagtgtccggg
ccagggagccgttcgtgctccgaaagcctgctggcggcgtacgcatcgtacgaacgcaac
tacgggcgctcacaggagacgctagcccaggcggctgcgctggtgtcgccgcactgcgag
agagcccccgcctggccgtcgcagggtgccaaggagcaggacaaggacttgggaaaccac
cacacggttacagccacaactgcagccacactggccacagccccctccgttggtcggcag
acccagcagcagcaggtggctgagccccagacccagagcaggaggttggaggaagaggag
ctggtgggttacaagagctacagcccctccttctgccgcaaggccagccacctcctccaa
caagcccactccttcagagaacccacctacatcggaccccacctcaactgggcacccagt
gccaaaaccagcccctcagactgcgagggaggctggataggagggggggtggtagttcct
cgtccttcctccaccccggccgtcatcccttcttcgtcggaggatgagagagtgctgggg
gaggagaggggggagtcgagggagacgctgtctcctctccctctgggccaggaggtggtg
ctgaggcagaagccccctatggggcgtcggacccccgtgcaggccctccgtcaccccctc
tacgccctcccagtggattcggccgagccccccgtcgggctgctgccctccccaaacaac
cccactgcagggacaccctcgcccgtctctgggggtaccagaatgggggacagtctaagg
aggcccaacggtagcctgcaaccccaccacagcacacccgactccctggcctccattccc
tttatagatgaccctatcagccctagcgctgacctacgtgcccgccacgtgcccgcctgc
tccgtggtgtcctcctccagtgccccgtgccctcttgtgtcctctttgccctgtgccctc
acctctagtaccactactgtctcccctgtcaccctctcctcctctacctcccccctcgtc
aaactccgctcccaggacagcagcagtatcaaaagccgccgttcctcctacctgctggcc
attaccacggagcgctccaagtcatgtgacgagggcctcaacaccttccgggaggaaggc
cgtgtcttctcgagactaccaaaaagggtcaagagctttttcactgatgggtctctggag
agtctacgtgctgcagaggaggcgcggtcgaaacgtcactccacctctgagctagggacc
atcaccttcagtgacgtacgcaaggacggctggcttcactacaaacagatcctcacggag
aagggaaaaaaggtgggcggcggcatgcgtccgtggaagcacgtcttctccgtgctgcgc
tcccactgccttttgctctacaaagacaagcgggaggcggtcctccacggggcgggggcg
ggacctggccacggggaggacgagcaccctccaatcagcatccgcggctgcctgattgac
attgcctatagcgaaaccaagcgtaagcacactctgaggctgaccactcaggacttctgt
gagtacctgttgcaggcggaggacagagatgacatgctgggctggatccgggtcatcaga
gagaacagcaagacagacaacgaggagctgggtttttccagacaagctctcatcagcaag
aagctcaatgactacaggaaacaaactacaacaggcaataagccagacacctctcccagg
gcccatcgcatgatgccccccttcctcctggccaagacagacaacgctttcatgaaccgc
tcctccagcaaggatgaaagcaagggtccatggggtatcatcatgaagaaagcaaagaag
acaggccccaaggtgtttggagtgcgacttgaggactgtcaacctgctgttaacaacaag
tttgtccctctgattgtggagctgtgctgtgggctggtggagagcatgggtctggagtac
actggcgtctacagggtgccgggcaacaatgccatggtgtccaacctgcaggagcagctc
aacaggggcctggagatcaacattactgaggagagatggcaggacctgaatgtgatcagc
agtctcctcaagtccttctttaggaaactcccagaacccctgttcactgatgacaagtat
aatgactttattgatgccaaccggctagaggactcagggaacaggctgaagagcatgaag
aaactgatccatgatcttccagaccactatcaccacactctaaagttcctggtctgtcat
ctgaagacagtggcggatcacgccgacaagaacaagatggagcccaggaacctggctcta
gtgtttggtcccactctggtgcgtacctcagaggacaacatgaccgacatggtcacccac
atgcccgaccgctacaagatcatcgagacgctcatcctgcatcacgactggttcttcagt
gatggagaggtggataaggatgaaaaggcacctgtggatattaagagggatatgcaaccg
gtccccaacatcgatcacctgctctccaacatcgggagaacagggctgcctggaagtgag
gcttcagattccaccaccagcgactcacctaaggataagaagtgcacatggggttccaag
aaggacctgagtgccagggacttcctcccgttgtcaatcatctccgcagtgacccggaaa
cgcaagatacgccccatctcccgccccctgagcagcagcaccgacgaagactccgaacat
gagccaatcaaagccagcaactacggggtagggggaggagccaaggaagatgaggaggaa
ggggttggaaaaggatgcgcccctaatggaactgaggaagtggaggaaaagggagaagag
gagtgtaggaagaggatagaggcaaaacagcagtctgacagaggaagagagaaggaggga
gaagggaagaaagaagggagtgcatgggcaaaagataaaggggtggcatcccccaaacct
catcctaacagcttcctctacacacactaccaacccaccaccaccagccctagcccccca
gtagagccctcagtctccccacattcgaagctccccggcctggcccgaggacgctccact
gtcccctcctggctctctccctccagacagcctggctctatccaaccttataacacccag
aaaacacaacagccccagttggaacagcagccactgccagtgcaatataggaagacaaga
ggaggaagggcaaggccccagtcaatgaatttggatatggtgatgggtaagggggagggc
gaggggggagttgggagacggggagatagggtgaaggtggtaagagccacaacagaagtg
caacgtcaccgcagcagttcagttggtgttcctcaggggtgtgttgtcgcatccctcaaa
gttcaaaggagttcacgcctagcctctgctctagccccatctccagtctctttctctccc
cctctcccttcctcctccttttccccttcatggacagatcagggatcccttggttctact
gttgtcaagcggaggtcggccctggagcctcgagacaagcggaaagcctggcgccgccac
acggttgtggtctaa
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integrated database retrieval system
