Oncorhynchus mykiss (rainbow trout): 110491728
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Entry
110491728 CDS
T07259
Symbol
ambra1b
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1b
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110491728 (ambra1b)
04137 Mitophagy - animal
110491728 (ambra1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110491728 (ambra1b)
03029 Mitochondrial biogenesis [BR:
omy03029
]
110491728 (ambra1b)
Membrane trafficking [BR:
omy04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
110491728 (ambra1b)
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
110491728 (ambra1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
110491728
NCBI-ProteinID:
XP_036806612
Ensembl:
ENSOMYG00000032459
UniProt:
A0A8C7SUJ0
LinkDB
All DBs
Position
2:complement(54213602..54268394)
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AA seq
1465 aa
AA seq
DB search
MASRHQRNSVRILSSRERGSQAFGSKRLLQQLVEEKVRWMKWQSQKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEV
RIWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSET
ERVRLVRFDPLGHNLLTATVNPSNQQNDDDSEVPMDSVEMPHFRQRSFLPSQPVRRTPIL
HNFLHILSSRSSGAQAGGDASRPGGESSGEPPSMPLGQYPASQDRGLPFPGCTQHLGMVC
LCSRCTANRSPSLGEGPSSRPVVLPEHPQPAPHASTFSSARTEPRQPSEPSGAQQRPSAF
TTVYYSAGSSLHRAVPTAHVASPPLSQQPQPPPTSHPPLSRPLPGPDWTRSLLNMRGSES
RTGGSEGGVSGVGGMGGVGGGMLPPRTSSSSVSLLSVLRQQDGSSQSPVYTSATEGRGFP
TQSSSEPGSGPVANQRGGGGAGTSSGHHPFWDGTRSNPTSFRNVLQCNLSRYFMEFDRMQ
DLESPLGGVGGGEGGQEQTQELLNNNMDPERPRPSSSHYQPQPLPPTPAENNPPPSNAAH
SSRGQLNRCRACHNLLTFNHDSQRWERTSPASSTSAVSTQEGSSSPWQQPTSPAYEETHV
SPQRREPQPQPPERERRVTQPPEPSERQPSPGPHGAAMPFPTIASSTAQPGEQTVGLVYN
QETGQWERVYRQAASSRSTVADAPPEALSQEMPVDNPDEDSLRRRLLESSLLSLSRYDMG
GSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRTLSSSSDSPAGNP
SAAMENSDVDFEELDDNGDRTRHRTPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERG
QPGLATHSSVNRVLAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVP
NCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAVYSLAPHNLGEVLYTKRFGPNAI
SVSLSPMGCYVMVGLASRRILLHPSTDHMVAQVFRLQQPHGGETSIRMVFNVVYPMAPDQ
RRHVSINSARWLPDPGMGLAYGTNKGDLVICRPVFYRSDGESPAEASAEPIFTVNSSGGT
SRTRSTDRPGAPSRSSWRLDRDMGLMNAIGLQPRHPAPSVTSQGTQTPIVQLQNAETQTE
RDLPRPSTSHAAAYEVRQEFPSTSREAKGSLEQPQTSQIEDSTLGDASTEAGTSTANTGE
APEYAPGEDALARIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRGSQTGAG
AAAKRPSSSDPILANPGPSTASPSTCPLNSLCLSLEHPPAPSEPRPGQVWGLPSLSQPQP
PGLASEGEGASLSMAMDIDNVFEGAGRMDDSEPGPSSSLLFSSSSSSHGSYPSGTGRNGN
NNNNNNNNNNGSNNRDSYPGDPYSR
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcgtcatcagaggaactctgtgcggatcctgtccagccgggagcgtggctca
caggcctttggctccaagcgcctgctgcagcagctggtggaggagaaggtccgctggatg
aaatggcagagtcagaaagtggagctgccagacagccctcgctcgacgttcctgttggcc
ttcagcccagaccggaccctcatggcttccactcatgtcaatcacaacatctacatcaca
gaggtgaagactggaaagtgcttgcattcgctggtaggccaccgccgtacgccctggtgc
gtgacctttcaccctacgatcccaggtctggtggcctccgggtgccttgacggagaggtc
cgcatctgggacctgcatggtggcagtgagagctggttcacggaaagcaacgtggccatt
gcctcgctagccttccaccccactgcccagctcctcctcatcgccaccaataacgagctc
cacttctgggactggagccggcccgagccctttgccgtggtcaaaaccggcagcgagact
gaaagagtcaggttggtgagatttgatcctttggggcacaatcttctgactgctactgtg
aacccctccaaccagcagaatgatgatgactcagaggtccccatggacagcgtagagatg
ccccacttccgccagcgctccttcctgccctcccagcctgtacgccgcacgcccatcctc
cacaacttcctgcacatcctttcctcgcgctcctcgggagcgcaggccgggggggatgcg
tcccgccctggcggggagagcagcggcgagccccccagcatgcctttgggccagtaccca
gcctctcaggaccgtggactgcccttcccaggctgcacccagcacctgggcatggtgtgc
ctatgcagccgctgcacagccaaccgcagcccctctctgggcgaggggccctcctccagg
cctgtggtcctccctgagcaccctcagccggccccccatgcctccaccttttcctcagcc
cgtacggagccccgacagccttcagagcccagtggggcccaacagcggccctctgccttc
acaacggtctactatagcgccggcagctccctgcaccgtgccgtgcctaccgcccacgtg
gccagcccgcccctgagccagcagcctcagccaccacccaccagccacccacccctctcc
cgcccactgcccggacccgattggacacgcagcctgctgaacatgagaggctcagagagc
agaactggagggagtgaaggtggggtgagcggggtaggtggtatgggtggtgtcgggggt
gggatgctgcccccccgaaccagctcgtcctccgtcagcctgctgtcagtgctccggcaa
caggacggctcctcccagtcccctgtctacacttccgccacagagggacggggtttcccc
acgcagtcaagctctgaaccgggctctggccccgtggccaatcagcgaggtggtggaggg
gcgggcaccagcagcgggcaccaccctttctgggacggcacacgcagcaacccaacctcg
ttccgcaacgtgctccagtgcaacctgagccgctacttcatggagtttgaccgcatgcag
gacctggagtcgcccctggggggcgttgggggaggggagggcggccaggagcagacgcag
gagctgctcaacaacaacatggacccggagagacccaggccttcctcctcccactatcag
ccccagccactcccaccaaccccagccgagaacaacccccctccctccaatgcggctcac
tcctctcggggccaactgaaccgctgccgggcctgccacaacttgctcaccttcaaccac
gactcccaacgctgggagcgcaccagcccagcctcatccacctccgctgtctccacccag
gagggctccagctctccctggcagcagccgaccagccctgcctatgaagagacccatgtg
tcaccacagaggcgggagccccaaccccagccaccagagagggagaggagggtaacccag
cccccggaacccagcgagcggcagccctccccaggccctcatggtgcggccatgcccttc
cccaccattgcgtcgtccactgcccagcccggtgagcagacggtgggcctggtgtacaac
caggagacgggccagtgggagcgcgtctaccgtcaggccgcctccagccgctccaccgtt
gccgacgcaccgccagaggccttaagccaggaaatgcctgtggataacccagacgaggac
tctctgaggaggaggctgttggagtcctccctcctctctctctcccgctacgacatggga
ggatccagagaccaccccatctacccagaccctgccaggttgtccccggctgcgtactac
gcgcagagaatgatccagtacctgtcgaggcgggacagtatccgccagcgttcgctgcgc
taccagcagaaccgcctgaggaccctctcctcctcttcggacagcccggccggcaacccc
tcggccgcaatggagaacagcgatgtggactttgaagagctagatgacaacggagacagg
acgaggcaccgaacaccacgcaacgccaggatgtctgcgccttcactggggcgattcgtt
cctcggcggtttcttttgcctgagtacctgccctacgctggaatcttccacgagagggga
cagcctggcctggccacccactcctctgtcaacagggtcctagcaggtgcctcaatcggg
gacggccagtcggcggtggccagcaacatagccaacaccacctaccggctgcagtggtgg
gacttcaccaagttcgatctacctgagatcagcaacgcctctgtgaatgtgctggtgcca
aattgtaagatctacaacgacgccagttgtgacatctcggcggacgggcagctcctggcc
gtgttcatacccagcagccagcggggcttccctgacgagggcatcctggctgtgtactcc
ctggcacctcacaacctgggggaggtgctctacaccaaaagatttggtcccaatgccatc
tcggtgagcctgtctcccatgggctgttacgtgatggtgggcttggcctcccgcaggatc
ctgctgcatccctccaccgaccacatggtggcgcaagtgttccggctgcaacagccccac
ggtggagagacctccatcaggatggtgttcaacgtggtctaccccatggctccggaccag
cggcggcacgtcagcatcaattcagccagatggcttccagacccggggatgggccttgcc
tacgggaccaacaaaggagacctggtcatctgcaggcccgtgttctaccgtagtgatgga
gagagcccggccgaagcaagcgcagagcccatattcacagttaacagcagtggtggaacc
agcagaacccgcagtacagatcgaccaggggcccccagtcgttccagctggagacttgac
agagacatgggtctcatgaacgccattggcctccagccccgacaccccgccccctctgtg
acctcacagggcactcagacacccattgtccagctgcagaatgccgagacacagacagag
agggacctccccaggcccagcacctcccacgctgctgcttatgaagtccgtcaagagttc
ccgtccacgagccgtgaggccaaagggagcctcgagcagccacaaaccagccagatcgag
gacagtaccctgggggacgcctcaacagaagccggcacctctaccgctaataccggtgag
gccccagagtacgccccgggagaggacgccctggcgcggatccgccggctcatcgcagag
ggcggaatgacggcggtggtccagcgggagcagagcaccaccatggcttccatgggtggg
tttggcaacaacattattgtcagccaccgcatccaccgcggctcccagactggggcgggt
gctgcagccaagcggcctagcagcagtgaccctattctggccaaccctggcccctctaca
gcctccccttccacttgccccctcaactccctgtgtctcagcctggagcacccccctgct
ccctcagagcctcgcccaggccaggtgtggggtctgccctccctctctcaaccacaaccc
cctggcctagcctcagagggtgagggggccagtctctcaatggccatggacatcgacaac
gtgtttgaaggagccggccgaatggacgattctgagccaggcccctcttcctccctgctc
ttctcctcctcttcttcctctcacggctcttacccctctggcaccggcagaaatggcaac
aataacaacaacaacaacaacaacaacaacggcagtaacaacagagatagttatccaggt
gacccttacagcaggtag
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integrated database retrieval system
