Oncorhynchus mykiss (rainbow trout): 110491736
Help
Entry
110491736 CDS
T07259
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110491736 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110491736 (smarcd2)
03036 Chromosome and associated proteins [BR:
omy03036
]
110491736 (smarcd2)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110491736 (smarcd2)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110491736 (smarcd2)
PBAF complex
110491736 (smarcd2)
GBAF(ncBAF) complex
110491736 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
110491736
NCBI-ProteinID:
XP_021421099
Ensembl:
ENSOMYG00000041455
UniProt:
A0A8C7WCH6
LinkDB
All DBs
Position
16:complement(26345698..26369499)
Genome browser
AA seq
494 aa
AA seq
DB search
MASRGGFPATQMNPSVNPMNAGHAGVGMRMPGIQQNSGFRAMNATPQYRQHPGMPSNRGI
PMGPIGGPGPSYGGGNMPLRIGMGQSAMDASRKRFLQQQPQGGLGGPRRGKRRRMADKVL
PQRIRDLVPESEAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLRIYISNTYTPG
KPEGEEAEKVSSWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRM
PTTQETDGFQVKRPGDVSVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQALWL
YIKNNKLQDSHEKEYINCNRYFRQILGCTRMRFSEIPMKLAGLLQHPDPIIINHMISVDP
NDQKKTACYDIDVEVDDPLKAQMNSFLSSTTNQQEIAALEMKIHETIESINQLKTQRDFM
LSFSNNPQDFIQDWLKSQSRDLKLMTDVAGNPEEERRTEFYQAPWVPEAVGRYVYSKVQQ
RRQELEQVLGIRLT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagagggggctttccggctactcagatgaaccccagtgttaaccccatgaac
gctggacatgcaggcgttggaatgaggatgccaggaatccaacagaattcgggtttccga
gccatgaatgccactccccagtaccgtcagcaccctggtatgccttccaacagggggatc
ccgatggggccaattgggggccctggaccctcttatgggggcgggaacatgcccttacgc
ataggaatggggcaatcagccatggatgcctctcgaaagcgattccttcaacaacaaccg
cagggggggctgggaggcccaaggcgtggcaaaaggcgcaggatggccgacaaggtgcta
ccacagaggatacgagacctggttccagagtctgaggcctatatggacctgctggccttt
gagaggaagctggaccagaccatcgcccgcaaacgcatggagatccaggaagccatcaaa
aagcccattacgcaaaagcgcaagttgaggatctacatatccaacacctacactcccggc
aagccagaaggcgaagaggcagaaaaagtgtcatcctgggaactaagggtggagggaaaa
ctccttgaggatcctgggaaacagaagaggaagttttcgtccttctttaagagtctggtc
attgagctcgataaggaactgtatggacctgataaccacttggtagagtggcacaggatg
cccaccacccaggagacagatggcttccaggtgaagagaccaggggacgtgagcgtgaaa
tgcaccctgctcctaatgctggaccaccagcccccacagtacaagctggacccaagactg
gcccggctgctaggtgtacacacccagacacgggctagcatcatgcaggcgctgtggctc
tacatcaagaacaacaagctgcaggacagccacgagaaggagtacatcaactgcaaccgc
tacttcagacagattttaggctgcacacgtatgcggttctctgagattcccatgaagctg
gctggcctgctgcagcatcctgaccccatcatcatcaatcacatgatcagcgtggacccg
aacgaccagaagaagacggcgtgctacgacattgacgtggaggtggacgatcctctgaag
gcccagatgaatagtttcctgtcctccactaccaatcaacaggagattgccgccctggag
atgaagatccacgagaccattgagtctattaaccagctgaagacccagcgagacttcatg
ttgagcttcagcaacaacccgcaggacttcattcaggactggctcaagtcccagagtcga
gacctcaagttgatgacggacgtggcaggaaacccagaggaggagaggaggactgagttt
taccaggccccctgggtgccagaagctgtgggccgatacgtctactctaaggtgcagcag
agaagacaggagttggagcaggtgctgggaattcgactcacctga
DBGET
integrated database retrieval system
