KEGG   Oncorhynchus mykiss (rainbow trout): 110491775
Entry
110491775         CDS       T07259                                 
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110491775
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110491775
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM14
Other DBs
NCBI-GeneID: 110491775
NCBI-ProteinID: XP_036802576
LinkDB
Position
16:27776282..27823581
AA seq 1024 aa
MLKQQPSSCGRKTSNWTPGPASMSSTASGINNRAQVGRSRTSVKPPFLSSPVFEGVYNNA
RMIHFLTAVVGSTCDVRVKNGNVYEGIFKTLGSRCELAVDAVHKRGEDERPALPRREEIT
DTMVFSSYDVVTMTCRDVDLNYATRDTFIDTSISSTRVNGEDKEKVLQRWEGGDGNGEAF
DLENDAANGWDANEMFRYNKVNFGVESTYDSSLSMYTVHLERGSTEGFRQREARAALMAS
EIESSPQYRQRVSLENEEGKSEEDKCSAVVRGGERGGGSPREREKGCDSPSIVSREGKYI
PLPQRAREIGASGGSMRGERERAERGPGGGSGGPQGHNRMSAGYRSAPPSSSSPKPHLPV
ATGGPQPPPSSSECSSPLSGRGYSPHHSQGSPGTASPYAPTSPGGPASANAASSSASPPT
PHSNSLSPLDTGRPVNGVSSRMSPKLQRPAQSNRPVRTPNSHTQSTASRSPKSGSQDSVQ
YLDTSSVSMPAQKTSGLAPLFPIDVNEILCMAAKERSAESPGTTEDGKSKAPSIQQRSQI
EELRKFGKEFRLQPSGCGSSAAAVSPSDTAKSFPSYPSPATSDSKQTLAPQSTSQPSASP
SGDPSKEPSSSAAATTVSPISDRQLPGQSQSARTPGSEESRQEKAERVEGVIDQVRKSTL
NPNAKEFNPNKVALTLTKPNPSPTPPRPPPPSPAVVLQHPGSQGPIYNAPYLSYISQIHS
VQPPHMYQYTMSTVCQGKYPRVKVMFWSPPGLGLGAPRSDHGNSGPPQAMLQAAASAAGA
PLMPSPYPQPYLQYSQQQVIQAMTPYPGQPMYSMLQGGARMLGQGGNHPQVMGPPGGPQF
PGQGEGPLVPQQGIYAPQSFSHHQGAVHQPRPSSTPTCNHPPPQQHAPSPGQSGPQTQSL
YHSGALSAPTPSNMPPGQTSPQGSFPLQGYSLHGHQGIPHTYPGLGQITQAHVQGAMQGP
HHQGQHGHPQVVMLQAPPPQHGLGQVSQHPQHGLQQGAHQHFYIGHPQAMQVQTHPSPFH
PPGN
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgttgaaacaacagcccagctcatgtgggcgaaaaacatccaactggactccgggccct
gccagtatgtcttccacggccagtggaatcaacaacagagcacaggttgggaggagtcga
acctctgtgaagccacctttcctgtcctctcctgtgtttgagggcgtctacaacaatgcc
agaatgatacatttcctcacagctgtggtgggctccacctgtgacgtaagagtgaagaat
ggcaacgtgtacgagggcatcttcaagaccctcggctcacggtgtgagcttgcagtggat
gcagtccacaagcgaggcgaagacgagaggcctgccctgccccggagggaggagatcacc
gacaccatggtcttcagctcttacgatgtggtcaccatgacctgccgagacgtggaccta
aactacgccaccagagacacgttcatagacacgtccatcagctcgacccgcgtcaacggg
gaagacaaagagaaggtgctgcagaggtgggagggaggagatggcaacggagaggccttc
gatttggagaacgatgctgccaacggttgggatgccaacgaaatgtttcgttacaacaag
gtgaacttcggcgtcgagtctacctatgactccagcctctcaatgtacacggtccatctg
gagaggggcagcacagagggcttccggcagcgggaggcacgtgccgccctcatggctagt
gagatcgagtccagcccccagtaccgccaacgcgtctcgttggagaacgaggagggcaag
agcgaggaggacaagtgcagcgcagtggtgcgcggtggcgagcgcggggggggaagcccc
agggagagggagaaaggctgcgacagccccagcatagtcagcagggaaggcaaatacatt
ccgttaccccagcgagctagggagattggcgcgtcggggggcagcatgcgaggagaacgc
gagcgggcggagcgaggccctggaggaggaagcggcggaccccaaggtcacaaccgcatg
agcgccggctaccgctcagcccctccctcctcttcctcccccaaacctcacctgcccgtg
gccactggtggaccccagccccctccctcgtcttcggagtgcagcagccccctctctggc
cgaggttactccccccaccactcccaaggcagccctggcactgccagcccctacgcccct
acctcccccgggggtccggcctcggccaacgccgcctcctcttcagctagtccccccacc
ccccattcgaactcgctgtctccgttggacactggtaggcccgtcaacggagtgtcttct
aggatgtctcccaaattacagagacccgcccagtcaaaccgaccggtccggacacctaac
tcacacacccagtccacagcctcccgctccccgaaatctggctcgcaggactcggtgcag
tacctggacacgtcatctgtctccatgcccgcccagaaaacatcaggcctcgccccactc
ttccccatcgacgtgaacgagatcctctgcatggctgccaaagaacgatcagcagagagt
ccaggcaccacggaagatggcaagagtaaagctccctccattcagcaaaggtcacaaatt
gaagagctgcggaaattcggcaaagaattcaggcttcagcccagcggatgtggctccagt
gctgcagcggtatctccctctgacacggccaagtccttcccctcgtaccccagccccgcc
acctcagactccaaacagaccctcgccccccaaagtacttcccagccctccgcttccccc
tcaggggacccctccaaggagcccagttccagcgcagccgctaccaccgtcagccccatt
tcagacaggcaattgccaggacaatcccagtcagccaggaccccaggaagtgaggagtcc
agacaggagaaggcagagcgagtggagggtgtgattgatcaagtcaggaagtcaactctg
aatcccaacgccaaagagttcaacccaaacaaagtcgcgctcactctgacgaagcccaac
ccttcacccacacccccccggccaccccctcccagccctgcggtggtgctgcagcaccca
ggcagccagggtcccatctacaacgcaccctacctctcctacatctcccagatccactct
gtacagcctccacatatgtaccagtataccatgtctacagtctgccagggcaaatacccc
cgagtcaaagtcatgttttggtctcccccaggcttagggttgggggccccacgctcggac
catggcaactctggcccgccgcaggccatgctacaggcggcggcgtctgcagccggagcc
cccctgatgccgtcgccctacccccagccctacctgcagtacagccagcagcaggtcatc
caggccatgacgccttacccaggacagccgatgtactccatgctgcagggcggtgcgagg
atgttgggccagggagggaatcacccccaggtcatgggccctccagggggcccccagttc
cccggccaaggtgaggggcctctggtgccacagcagggtatctatgccccccagtcgttc
tcccatcaccagggtgcagtgcaccagccccggccctccagcacccctacgtgtaaccat
ccccccccccagcagcacgcccccagccctggacagtcgggaccccaaacccagtctcta
tatcactccggggcgctctcagcccccaccccttctaatatgcccccgggacaaacatcg
ccccagggctcgttcccccttcagggctacagcctgcatggccaccagggaatcccgcac
acgtaccccggtctggggcagataacacaggctcacgtccaaggggccatgcagggaccc
caccaccagggccaacatggccacccgcaggtagtgatgctccaggccccgcccccccag
cacggccttggacaagtctcccagcacccccaacacggcctccaacaaggggcccaccaa
cacttctacataggacatccacaagcgatgcaggtacagacgcacccctctcccttccac
cctcctggaaactga

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