Oncorhynchus mykiss (rainbow trout): 110492007
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Entry
110492007 CDS
T07259
Symbol
lima1a
Name
(RefSeq) LIM domain and actin-binding protein 1a isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110492007 (lima1a)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
110492007 (lima1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
110492007
NCBI-ProteinID:
XP_021421626
Ensembl:
ENSOMYG00000027258
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All DBs
Position
16:41714511..41728197
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AA seq
714 aa
AA seq
DB search
MTVAPFSRRQWASQSLRVTAAELSIVGTRGKNNAIAERFSKYQLAAEEANLERKKAAAEP
SPQTFRSCSLSVLKKLWEQPVQSATPCATLPHTRRLLPSDPNAKHQTQAQPPLSPDPNTS
PTAAEDQAGPGMERRRQQRDRERQEGGAAEVPCIPSEKPDIPLNNLKMMFEKGENLQNKV
SREPVRIGGTGGITDNMDQLLGDSGSIESMPLRDRMAMYQAAVSKTEVLSSSVSSDQLDS
DLCSKQKENVPPGSVDTGPDSEPNSRKASSTESNAGSSTGTFSASPTQKDQAQPKTSRSF
CLPARESCVSCQKTVYPLERLVANQKVYHNTCFRCSHCNTKLSLGTYASLHSHVYCKPHF
CQLFKAKGNYDEGFGLRPHKELWETKGESGAGEEPRTELTTKATSFSKDKLKKCASTGTL
LISPAVEESPLAKVNVVTASLETRAQSSAEKDKPVETRRLKISWPPRTEGDGEGSNIGDS
PTSDGSSAGKQSRAKWPPEDDSASTDQSPEPTVRSTLCRSASLKERSRPFSLAMASHAPA
ASQTANPEPLERRSSFEDREPELACSPEEQGMEDKEQPNSLSPDYHTPSDDSYVDIHTSS
EDEGMEGRVARLKDHHELLEANHEQGAKNDGEEEEKLEGEEEGAGKEGEGLPSQNCQTAS
SEIAAPPSSLETEPRSKTNRTSQDVGFWNGEEAVSVEEMIKRNRYYEEDEDEED
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgctccgttcagtcgcagacagtgggcctcccagtccctcagagtcacagct
gcggaattgtccatagtcggcaccagaggaaagaacaatgccatcgctgagcgcttctcg
aagtaccaactggctgcagaggaagccaacttggagaggaagaaagctgctgcggagccg
tcgccacagactttccgcagttgcagcctgagtgtgttgaagaagctttgggagcagcct
gtccagtcagccacaccttgtgccacgctaccccacactcgccgcttactcccctcagat
cctaacgccaagcaccagacccaggcccagccacctctctcaccagaccccaacaccagt
cccacagccgcagaggaccaggcaggaccaggtatggagaggagacggcagcagagagac
cgagagaggcaggagggaggagcagcagaagtgccttgcatccccagtgagaaacccgac
atacccctcaacaacctcaagatgatgttcgagaaaggagagaaccttcagaacaaagtg
tccagagagcctgtgaggattggagggaccggaggcatcactgacaacatggatcagcta
cttggagattcagggagcatagagtccatgcccctgagggacaggatggccatgtaccag
gctgctgtgtctaaaacagaggtgttatcctcctcagtcagcagtgatcagctggactct
gacctctgcagcaaacagaaggaaaatgtacccccaggcagtgtggacacgggtccggac
tcagagcccaacagtaggaaagcatcttccacagagagcaatgcaggctccagtaccggc
accttctctgcatccccgactcagaaggaccaagctcagcccaagacctccaggagcttc
tgcttgcctgcacgggagagttgtgtgtcatgtcagaagacggtctaccctttagagcgt
ctggtagctaaccaaaaggtctaccacaacacctgtttcagatgctcccactgcaacacc
aaactcagcctggggacctacgcctctctgcacagccacgtctactgcaagcctcacttc
tgccagctgttcaaggccaagggcaactacgacgagggcttcggcctgcgccctcacaag
gagctgtgggagaccaaaggagagagtggggctggggaggaacccaggacagagctgact
accaaggccacctccttttccaaagacaagctgaagaagtgcgcctctactggcacgctg
ttgatcagcccagcagtagaggagtctccactggccaaggtcaacgtggtgacggcctcc
ctggagacccgcgcccagagctcagcagagaaggacaagccagtggaaacacgtcggctg
aagatctcctggcccccccgcactgaaggagacggagaggggagtaacattggggacagt
cccacctcagacgggagctccgctgggaaacaatcccgtgctaagtggcccccagaggat
gactcagcctccaccgaccagagcccagagcccaccgtacgctcaaccctctgcaggagc
gcctccctcaaggagcgtagccgacccttctcattggccatggcctcccatgctcccgct
gccagtcagacagccaatcctgagccactggagaggagaagctcattcgaggacagggag
cctgaactggcctgtagccctgaggaacaaggcatggaggacaaggaacaaccaaacagc
ttgtcacccgactaccacacgccttctgacgacagctacgtggacatccacaccagctct
gaggacgaggggatggaagggagagtcgcacgtctgaaagaccaccacgaattactagaa
gcaaaccatgaacagggagcaaagaatgacggggaggaagaggaaaagctggagggagaa
gaagagggagcaggaaaagagggggaagggttaccttctcaaaactgccagactgcctcg
tcagagattgccgcgcccccctcgtctctggagactgagccgaggtccaagaccaaccgc
acgtctcaggatgtgggcttctggaacggcgaggaggccgtatctgtagaggagatgatt
aagaggaaccgctactatgaggaagatgaggacgaggaggactga
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