Oncorhynchus mykiss (rainbow trout): 110492074
Help
Entry
110492074 CDS
T07259
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110492074
03015 mRNA surveillance pathway
110492074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110492074
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110492074
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110492074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110492074
NCBI-ProteinID:
XP_021421748
Ensembl:
ENSOMYG00000018173
LinkDB
All DBs
Position
16:complement(43742295..43747314)
Genome browser
AA seq
493 aa
AA seq
DB search
MATDSWALAVDKQEATTDSFGSLVIRSLPRGGGDAAPNKAKKGTTKQVENGTNVEGEEKE
DKAAQSLLNKMIHTSLVNTTNQVEVLQRDPNSPLYSVKTFEELRLKDKLLKGVYDMGFNR
PSKIQENALPMMLAEPVYYPSGSRPQNLIAQSQSGTGKTAAFVLAMLSHVDPTNKWAQCL
CIAPTYELALQTGKVIEQMGKFYPEVKLAYAIRGNKLDRGAKLQEQIVIGTPGTVLDWCS
KLKIINPKKISVFVLDEADVMIATQGHQDQSIRIQRMLPKECQMLLFSATFEDSVWKFAE
RVVPDPNIIKLKREEETLDTIKQYYVLCSDKEEKFTALCNIYGAITIAQAMIFCHTRRTA
GWLAAELTKEGHVVALLSGEMTVEQRATIIERFREGKEKVLVTTNVCSRGIDVEQVSVVI
NFDLPMDKDGNADNETYLHRIGRTGRFGKRGLAVNMIDSKHSMNILNQIEEHFNKKINKL
DTDDLDEIEKISN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggctactgactcctgggcccttgctgtcgataaacaggaagctacgactgactcattc
ggctccttggtgataagatctctacctcgaggtggaggtgatgctgcacctaataaggca
aaaaagggtaccacaaagcaagtggagaatggcaccaacgtagaaggagaggaaaaagag
gacaaagcggcccagtcattgttgaataagatgatccacaccagccttgtgaacactacc
aatcaagtagaggttcttcagagggatcccaactctcctctttactcggtcaagacattt
gaagagctgaggctgaaagataagctgctgaagggagtgtatgacatgggcttcaacaga
ccctctaagatccaggagaatgccctgcccatgatgctggcagagcccgtgtattatccc
tctggttccagacctcagaacctgattgcccaatcacagtccggtacaggtaaaacagct
gccttcgtgctggccatgctcagccatgtcgacccaactaacaaatgggcacagtgtctt
tgcattgccccaacgtacgagctagctttgcagactggtaaagtcattgagcagatgggg
aaattctatcctgaggtcaaattggcatatgccattcgtggcaataaattggaccgaggg
gcgaagcttcaggagcagattgtcatcgggacacctggcacggtcttggactggtgctcc
aaactgaagatcatcaatcccaagaagatcagcgtctttgtcctggacgaggctgatgtc
atgatcgccacacagggtcaccaggaccagagcatccggatccaaagaatgttgccaaag
gaatgtcagatgctgctgttctctgccacctttgaggactctgtgtggaagtttgctgag
agggttgtgccagaccccaacatcatcaagctgaaacgtgaagaggagactctggacacc
atcaagcagtattacgtgctttgcagcgacaaggaggaaaagtttacagcactctgtaat
atctacggcgccatcaccatcgcccaagctatgatcttctgtcacacccgaaggacagct
ggctggctggctgcagagctgaccaaggagggccatgtggtggcgctgctgagtggggag
atgactgtggaacagagagcgaccatcatcgaacgcttcagggagggcaaggagaaagtc
ctggtgaccaccaacgtatgctccagaggcattgatgttgagcaagtttctgtggtgata
aattttgacctgcccatggacaaagacggaaacgctgacaacgagacataccttcaccgg
attggtcgcacaggacgtttcggcaagaggggccttgcagtcaatatgattgacagcaaa
cacagcatgaacattctcaaccaaatcgaggaacatttcaataagaagatcaacaagctt
gacactgatgatcttgatgaaatcgagaaaatcagcaactag
DBGET
integrated database retrieval system
