Oncorhynchus mykiss (rainbow trout): 110492096
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Entry
110492096 CDS
T07259
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03266
Virion - Herpesvirus
omy04145
Phagosome
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04810
Regulation of actin cytoskeleton
omy04820
Cytoskeleton in muscle cells
omy05100
Bacterial invasion of epithelial cells
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
110492096 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110492096 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110492096 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
110492096 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110492096 (itga5)
04810 Regulation of actin cytoskeleton
110492096 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110492096 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110492096 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110492096 (itga5)
04515 Cell adhesion molecules [BR:
omy04515
]
110492096 (itga5)
04090 CD molecules [BR:
omy04090
]
110492096 (itga5)
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110492096 (itga5)
Cell adhesion molecules [BR:
omy04515
]
Integrins
Integrin alpha subunits
110492096 (itga5)
CD molecules [BR:
omy04090
]
Proteins
110492096 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
DctQ
Motif
Other DBs
NCBI-GeneID:
110492096
NCBI-ProteinID:
XP_036802915
Ensembl:
ENSOMYG00000025626
UniProt:
A0A8C7RTT2
LinkDB
All DBs
Position
16:complement(45378265..45432804)
Genome browser
AA seq
1054 aa
AA seq
DB search
MGSRRYRSEKPGEVNYPFCCIGVCLIIILQLCAAFNLDVENPTVYSGPNGSYFGYSVEFY
LTNSSSVSVVIGAPKANTSQRNITEGGSVYYCPWSLGQSECHNIEFDNQGDRTVTLNNTD
YQAEVKSHQWFGATVRSHDDTILACAPLYSWRTKEDMPQSDTTGTCYLSVKNFTKFVEYA
PCRTEFINEGGQGYCQGGFSADFTKDGKVVLGGPGSFFWQGQVISAAKEEIIKAYYPGYF
MQSVEGQIQTRQAQLKYDDSYRGYSVAVGEFSGDEVEDFVAGVPKGVMLYGLVSVLNGTD
LKSMLDYTGEQMGSYFGYAVATADINNDGMVDLLVGAPMYMTRGSDSRLEEVGRVYVYLQ
RGPLNLEPTLNLTGTQVFGRFGSTIAALGDLNQDGYNDVAISCPFGGDDQQGLVLIYNGF
VGGLRDTPSQVIAGQWASGTVPASFGFALRGAKDLDMNGYPDLIVGAFGVDKTVLYRSRP
IVNTSASLTVYPTMINPEEKSCSVNNGNTTIPVSCVNLSFCLSANGKYLPDNLDFQVEVQ
LDRLKHKQKGGVKRALFVDSQQTVLTRSVRVRNRERVCHDTKIYLRDDKEFRDKLSPIYI
SLNFSLDPQAAFDSHGLRPILNYQSTELIEQKAQILLDCGEDNICVPDLKLAVHGDRKEA
YLGDDNSLTLTFNARNEGEGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYETENQT
RYLSCDLGNPMKSGTSLWAGLRFTVPRLKDTRKTVQFELQIRSKNENNSHSEVVPYRLEV
VVQADVILQGVSRPDKVFFPPPNWKVSKSPQVEQDIGPAVQHVYELVNKGPSGISHTVLQ
LSCPLSVQGQGLLYPLEISTEGPLNCTTNHSINYMQLKLQQSSTEQPPLLVPGQDHHIER
RDVHRDQLAEHTNLSCSNVECWTLQCDVGLLEKGTSAILKVRSRIWAETFIERAYKGYVL
ECLARFSVIKMPYAILPKELPSGSKKVVTPVVWNKPDSQYSVPMWIIILAILAGLLLLAL
VIYVLYKLGFFKRSLPYGTAMEKAQLKPHATSEA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggttccagaagataccgttcggagaagccgggagaagtgaactacccattctgctgc
attggggtttgtctgataataatcctacagttgtgtgctgcgttcaacttggacgtggaa
aaccccacggtctacagcggacctaatgggagctactttggatattccgttgaattttac
ttgaccaattcctcaagtgtcagtgtggtgatcggtgctcccaaggccaataccagccag
cgcaacatcacagagggcgggtccgtgtactactgcccatggagtctcggccaatcagag
tgccacaacattgagtttgacaatcaaggggaccgaacagtcacactcaacaacacagac
taccaggctgaagtcaagtcccaccagtggttcggcgccaccgtccgttcccacgacgac
accattctggcctgcgcccctctgtactcctggaggaccaaagaagacatgccccagtca
gataccacaggaacctgctacctctctgtcaagaacttcactaagtttgtggaatatgct
ccctgtcgcacagaattcattaacgaggggggccagggctactgtcaggggggattcagt
gctgatttcaccaaggatgggaaagtggtgcttggaggaccaggcagcttcttctggcaa
ggtcaggtgatctcagcagccaaagaagagatcatcaaggcttactacccagggtacttc
atgcagtctgtagagggacagatccagaccagacaggctcagctcaaatatgacgacagc
taccgcggttactctgttgcagtcggggaattcagtggagatgaggtggaagattttgtg
gctggggtcccaaaaggagtcatgctatacggtttggtgtctgttttaaatggcaccgat
ctgaagtctatgctcgactacactggtgaacagatgggctcctattttgggtacgctgtg
gccacagctgacatcaataacgacggcatggttgacctgttggtgggagctcccatgtat
atgacccgggggtcagacagtcgcctggaggaggtgggccgtgtgtacgtctatctgcaa
cgtggacccctgaacctggagccaaccctcaacctgaccggaacccaggtgttcgggagg
tttggtagcaccattgccgctctgggagatctcaaccaggacggatacaatgatgtggcc
atcagctgtccattcggtggagatgaccagcagggattggttctcatctacaacggattt
gttggtgggctcagggacaccccctctcaggtcatagctggccaatgggcttcaggcact
gtgcccgcaagctttggatttgccctccgaggggctaaagacctggacatgaatggttac
ccagatcttattgttggtgcttttggagttgacaagacagttctgtacagatcccggccc
atcgtcaacaccagtgcctccctgactgtctaccccaccatgatcaaccctgaggagaag
agttgttcagtcaacaacggcaacaccaccatccctgtctcctgtgtcaacctgagtttc
tgcctctcggccaatgggaagtacctcccagacaacctagacttccaggtagaggtgcag
ttggaccgtctgaagcacaagcagaagggaggggtgaagagggctctgtttgtagactcc
cagcagacagtgctcacgaggagtgtgagggtgcggaacagagagcgtgtgtgtcatgac
accaagatctatctgagggatgataaggagttcagagataagctctcccccatctacatc
tccctcaacttcagtctggatcctcaggcagctttcgactcccacggcctcagacccatc
ctcaactaccagtccaccgagctcatcgagcagaaggcccagattctgctggactgtgga
gaagacaacatttgtgttcctgacttaaagctggcggtgcacggggaccggaaggaagcg
tacctaggtgacgacaactcactgaccttgactttcaacgctcggaacgagggtgaagga
ggggcctacgaggctgagctgtacgtggtgctgcctcctgaagcggactacagcggtata
gcccgcaataacgagagcctgacccagctaacttgtagctacgagacagagaaccagacc
cgctacctcagctgtgacctgggcaaccctatgaagtctggcaccagcctgtgggcaggt
ctgcgcttcactgtgccacgactgaaggacacgcgcaagacggttcagtttgagctgcag
atccgcagtaaaaatgagaataattcccacagcgaggtggttccctacaggttggaggtg
gttgtccaggccgatgttattttacaaggagtctcccggccagacaaggtcttcttccct
cctcccaactggaaggtgtccaagagcccccaggtagagcaggacatcgggcctgcagtc
caacacgtctatgagctggtgaacaaaggccccagtggtattagccacacagtgcttcag
ctcagttgtcctctcagtgttcagggccagggtctcctctaccctctggagatctctact
gagggacccctcaactgcaccaccaaccactccatcaactacatgcagctcaagctccag
cagtcgtccacagagcagcctcccctacttgtgcccggccaggatcaccacatcgagagg
agagacgtccacagagaccagctggctgagcacactaacctgtcctgctctaatgtagaa
tgctggacgctgcagtgtgacgttggtcttctggagaaggggaccagcgccatcctcaaa
gtgcgctcacgcatctgggctgagaccttcatcgagagagcatacaaagggtatgtgctt
gagtgcctggcaagattcagtgtaatcaagatgccctatgccatcttacccaaggagcta
ccaagtggatctaaaaaggtggtgaccccggtggtgtggaacaagccggacagccagtac
tctgtgccaatgtggatcatcatcttggccatactagctggacttcttctgctggcactg
gtgatttacgtcctgtacaaacttggcttcttcaagaggtcgctaccctacggcacggct
atggagaaggcccaactcaagccccatgctacgtctgaggcctaa
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