Oncorhynchus mykiss (rainbow trout): 110492100
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Entry
110492100 CDS
T07259
Symbol
pou6f1
Name
(RefSeq) POU domain, class 6, transcription factor 1 isoform X5
KO
K09368
POU domain transcription factor, class 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110492100 (pou6f1)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110492100 (pou6f1)
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GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110492100
NCBI-ProteinID:
XP_021421794
Ensembl:
ENSOMYG00000026275
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Position
16:complement(45525987..45536632)
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AA seq
640 aa
AA seq
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MDLQDLPAADTPLTVNEQVIVMSGHETIRVLEVEVDQASLPSSMPDGRTDSGGEDVSNQA
KQPEAGTQDSPPAPHNTGGVGEPFVGYRYVLGDQVVAVDSAASAVQTLAQTAVPISVSLS
QPQATMPITVQSLQGCQQVLTQDGLATLMTGMMAQTGSLGQPLLIPLSMAGSMGGQGLAV
LTFPTSNVATLPGLSAASQSGGLLKLPFAGLQGLQGLQTATVLNPVQTQQAVFQSQTASL
QQVQAAMQQAQQNTQVAAAQLTQAMPSVSQPSVSVSTLQSAGLSINPAINNMFWMPPFLS
SQISAASLGAQPQFISSLTSTPIITSAMSGITSQIITNAQGQVIGTIPLMLNPASLTGGA
ATQALNLQGFQGLQVQTVQPQLVLNNQGQIIATIGNGPATVPTSAAIIPKHNVPVTFSKP
STQAQVTTVTQSPVVIAPQPFAMKTVTPISSSVPLTCGDTPTVGQLVSKPQQGCTDEEGI
NLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLK
PVLERWLAEAELWNQKGQQNLMEFVGGEPSKKRKRRTSFTPQAIEVLNTYFEKNALPTGQ
EITEIAKELNYDREVVRVWFCNRRQTLKNTSKINVFQVQP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcaggatctccctgctgctgacacacccctcactgtcaatgaacaggtgata
gtgatgtctggtcatgagacgatccgtgtcctggaagtggaggtagatcaagcctctctt
ccatcctcaatgcctgatgggaggactgattcggggggtgaggatgtgagtaatcaggct
aagcaacctgaggcaggaacacaggacagcccgccagcaccccacaacactgggggagta
ggtgagccctttgtaggataccgatacgtgctgggggaccaggtggtggctgtcgattct
gcagcctctgcggtccagactcttgctcagactgcagttcccatcagtgtctccctgtcg
cagccacaggccaccatgcccatcactgtgcagagcttgcagggctgtcaacaggtcctg
acccaggatggtctggccactctgatgacagggatgatggcccagacaggctccctgggc
cagcccctgctcatccccctcagcatggcagggtccatggggggccagggcctggctgtc
ctcaccttccccaccagcaacgtagccacactccctggcctttcagctgccagccagtcc
ggaggcctcctcaaactaccatttgccggcttgcaaggcttacaaggcttgcaaacagcc
actgtgctaaaccctgtccagacccagcaggcggttttccagtctcagacagcatcacta
cagcaggtccaggcagctatgcagcaggctcagcagaacacgcaggtggctgcagcacaa
ctgacccaggccatgccgtccgtctctcagcccagtgtgtctgtgtcaacactccagtct
gcaggcctctccatcaaccctgccattaacaatatgttctggatgcctccgtttctctcc
tctcagatcagtgctgcgtctctaggggctcagcctcagttcatcagctccctcacttcc
actcccatcatcaccagtgccatgtctggaatcaccagccagatcatcaccaacgcacag
ggacaggtgattggaaccatccccctgatgctgaaccctgcctcactgacaggaggggct
gctactcaggctctgaatctccagggctttcaaggcctgcaggtccagacagtccagcca
cagctggttctgaacaaccagggccagatcattgccaccataggaaatggacctgctaca
gtccccacttctgctgctattattcccaagcataatgttcctgtgacattctcgaagccc
agcacccaggctcaggtaacaactgttacgcaatcacctgtggtcatcgccccacaaccg
tttgcaatgaagacagtcactccaatctcctcctcagtccctctcacctgtggagacaca
cccaccgtgggccagctcgtcagcaagccacagcaagggtgcacggatgaggagggcatt
aatctggaagagattcgagagtttgccaagaacttcaagatccgccggctgtccctgggg
ctgacgcagacacaagtgggacaggccctcacggctacagagggcccggcctacagccag
tctgccatctgcaggtttgagaagctggacattacacccaagagtgctcagaaactgaag
cccgtgctggagcggtggctggccgaagcagagctatggaaccaaaagggtcagcagaat
ttgatggaatttgtgggtggtgagccgtctaagaaacgcaagcgtcgcaccagcttcacc
ccgcaggccatcgaagtgctcaacacctactttgagaagaatgccctgccaacgggccag
gagattacggaaatcgctaaggagctcaactacgaccgtgaggttgtccgtgtatggttc
tgcaacaggcggcagacactgaaaaacaccagcaagatcaatgtgtttcaagttcagcct
taa
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