Oncorhynchus mykiss (rainbow trout): 110492148
Help
Entry
110492148 CDS
T07259
Name
(RefSeq) calmodulin-binding transcription activator 1 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110492148
Transcription factors [BR:
omy03000
]
Eukaryotic type
Other transcription factors
Others
110492148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
TIG
IQ
Ank_5
AGRB_N
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
110492148
NCBI-ProteinID:
XP_036802982
LinkDB
All DBs
Position
16:complement(47409235..47908274)
Genome browser
AA seq
1856 aa
AA seq
DB search
MAAENKPEGLKKIRNPDRMYRSAVCYAGHAPPKSISDDTEMNNEHGHLKIYLPKKLLECL
PKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDG
YCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLN
VPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVE
QLVQQILDSHQTKPTPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVDPRGGYSSGHS
EVQNNDVSEGKTEHSSHGGGGKSYGGGGGSAREKRNGKVHKPVLLHQNSTEVSSTNQVEV
PDTTQNSPVSISSGLNSDPDMADSPVVTGMGHVASVLSSLSQSVFMSEVTGDPGYSMSPN
GGPNAHLMGPDAASQGLVLSGVVADNHKFAFPSGGAGEGPGGAGGADGLSMLSAAGVSEE
LVLSSSLDAGGMKIPETTMNFDPDCFLNNPKQGQTYGGSRLKGGGSSSSSSSSSNGTNGS
MQRSPSMSDSGYSFNSALVKNIKTEDMSFEQQLATEQGYQVGAVVSCGGGGAGSSGAGSA
QGSLGLTPAGSLLPSGGGLSPSTTLEQMDFSAIDAKQEYSSGAGSVGYGQAINSPHLSHQ
SHSPSFFLQDTQQSGQAQQGRSSMGQKTHLMEHNSHDSTAYMGLQVVKTDSPGINGHLHH
HHQSHHRANCNGGSPTEGPGQGPGSLQLLQYQGGFPGLGPEHEEVVGLEQPGSVGSGQAG
GTENGEGLLKPGDHLQACGGGNPEGGGTEHYLQQANGGGGQGGGGGGEGVTMHNGNGINN
DGSNRSQQQQQLQPLLQGAGMVQGLYNTVGPHQGLGGSGSNGGAGGGGMEISLDHFDISF
GNQFSDLINDFISVDGSGTNMAAGGALYNHQLVANHGSEGQATPSGAPQQGQEDGGVGGA
RGAGYSPSELCLQPCCSPQSLGAGAGGAGTESGSLAYMDVAEVVSAAVAHGALGMLQATG
RLFMVTDYSPEWSYPEGGVKVLITGPWQEASSNYSCLFDQISVPASLIQPGVLRCYCPAH
DTGLVTLQVTASNQIISNSVVFEYKARALPSLPSSQHDWLSLDDNQFRMSILERLEQMER
RMAEMASHHQQGSGGGAGGGGGAGAGGGGGGGGGGHNSQTQCVSGQGQAGSSFESRVVVV
CEKMMNRACWAKSKHLIHSKTFRGMTLLHLAAGQGYATLIQTLIKWRTKHADSIDLELEV
DPLNVDHFSCTPLMWACALGHLEAAVVLYKWDRRALAIPDSLGRLPLSIARSRGHTKLAE
CLEQLQREEQQPPAPLPPTTRMSFSPTPHDAPTSDSWMVTWASDGVMAPGGKKGGSTTAT
SSNLNPDLRRPRSEPSNYYSSECQRDLPLAKKHKPNPEMFQARPDKAMSVPLSLEQQQLH
KLSFSPKSLSHEGLSPDKSLSGGGSAGESGGTKWRSREGFSSGGSSRKGSGGSGGSSLGK
EKLASRLRQREQLGNMLVIAEREMVSTELLSYREDLENQDCMTQMNDLQVNMMTLAEHII
EATPERIKRENFVALDGVPLDSTGVSNTMSWLASYLGDVEQLPSIIHLRSLYSGPLAPSS
SPGGSPLREGSMGRPTLPPPADWSEFLQASNSKVERDLAQLTLSDPEQRELYEAARLVQT
AFRKYKGRPFRDQQEVAAAVIQRCYKKYKQLTWIALKYALYKKMTQAAILIQSKFRSYQE
QRKFQQSRRAAVLIQQYYRGYKEFGRLRPHRRGAAAALVQHKLRSSLLSKRQDQAARKIM
RFLRRCRHSPLMDHRLFKRVSAASATQFVLLFLSSSSTLYVSASLSLTIQLYILSP
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgaaaacaagccggaaggactgaagaaaattcgtaatccggatcgaatgtac
agatcagctgtgtgttatgccggccatgctcctcctaagagtatcagtgatgacacagag
atgaacaatgaacatggacatttgaaaatatacctgcccaaaaagctgctagaatgtcta
ccaaaatgctcgtcgctgccaaaggagagacacaggtggaacaccaatgaggagattgca
gcttacttgataacatttgaaaagcatgaggaatggctaacgacgtcccctaaaacaagg
ccacagaatgggtcgatgatcttgtacaacaggaagaaggtgaagtacagaaaggatggc
tactgttggaagaagaggaaagatgggaagaccacgcgggaggatcacatgaagctcaaa
gtccagggagtggagtgtctgtatggctgttacgtccactcctccatcatccccactttc
caccgcaggtgctactggctgctccagaaccctgacatcgtgctcgtccactacttgaat
gtgccggccatagaggattgtgggaagccatgcgggccaatcctgtgctccatcaacacg
gacaagaaggagtgggccaagtggaccaaggaggagctgattggccagctcaagcccatg
tttcatggcatcaagtggacttgcagcaacgggaacagcagctctggcttctcagtggag
cagctggtgcagcagattctggacagccaccaaaccaagccaactccccggacccacaac
tgcctctgcacaggcaccctgggcgcagggagcagtgtgcaccacaagtgcaacagcgcc
aaacaccgcatcatctcccccaaggtggacccccgtggaggctacagcagcggtcactct
gaggtccagaacaacgacgtgtccgagggcaagaccgagcacagcagccatggagggggg
gggaaaagttacggagggggaggcggcagcgccagggagaaacgcaacggcaaggtccac
aagcctgttctcctgcaccagaacagcaccgaggtgtcctctaccaaccaggtggaggtc
cctgacaccacccagaactcccccgtgtccatcagcagcgggctgaacagcgacccagac
atggctgacagtcccgtggtgacgggcatgggccacgtggcttccgtcctgtccagcctg
tcccagagtgtattcatgtccgaggtgaccggggaccccggctacagcatgtcacccaat
gggggccccaacgcccacctcatgggccccgacgcagcctcccagggactggtgttgtcc
ggtgtggtggcagacaaccacaagtttgccttccccagcggaggggcaggggagggtccc
gggggggcagggggagcagatgggctgtccatgctgtctgcagccggtgtgtctgaggag
ctggtcctgtccagcagcctggatgccggaggcatgaagatacctgagaccaccatgaac
tttgaccctgactgcttcctcaacaaccccaagcagggccagacctacgggggcagcagg
ctgaaggggggcggcagctcctcctcttcctcctcttcctccaatggcaccaacggcagt
atgcagcgctctccatccatgtcagactctggatacagcttcaactctgctctggtgaag
aacatcaagacggaggacatgtccttcgagcagcagctggccacagagcagggctatcag
gtgggggcggtggtgagctgtggaggaggtggagctggttcctctggggctggttcagcg
cagggctccctcggcctgaccccggctggctctctgctgccctctggaggaggcctgagc
cccagcaccaccctggagcagatggacttcagcgccatcgatgccaagcaggaatactcc
tccggggctgggtcagtgggctatggccaggctataaacagcccccacctctcccaccag
agccactcgcccagcttcttcctccaggacacccagcagtccggccaggcccagcagggc
aggtcctccatgggccagaagactcatctgatggagcacaactcccacgactccacagcc
tacatgggcctgcaggtggtcaagacggactcccctggcattaacggccacctccaccac
caccaccagagccaccacagggccaactgcaacgggggctcccccaccgaggggccaggg
caggggcctgggtctctccagcttctacagtaccaggggggcttccctgggctgggacca
gagcatgaggaggtggtgggtctggagcagccaggaagcgtgggctcaggccaggcaggg
ggaacagagaatggagagggcctactgaagcctggggatcaccttcaggcctgtggagga
ggcaacccagagggaggagggacagagcactacctgcagcaggccaacggtggaggaggt
cagggaggcggaggaggaggggaaggagtgaccatgcataacggaaatggcatcaacaac
gacggcagcaaccgctcacagcagcagcagcagctgcagcccctcctccagggggctggg
atggtccagggcctctacaacaccgtagggccccaccagggcctgggcggatcgggctct
aacggcggagcaggagggggaggcatggagatcagcctggaccacttcgacatctccttt
ggaaaccagttctctgacctcataaatgacttcatctctgtggacggtagtggaaccaac
atggcggccgggggagctctttacaaccaccagctggtggccaaccacggctcagagggt
caggccacgcctagtggagctccccagcagggccaggaggacggaggggtaggaggggcc
cggggggcaggatacagcccctcagagctctgtctccagccgtgctgcagccctcagtct
ctgggtgcgggggctgggggtgcagggacggagtcaggctctctggcatacatggacgtg
gcggaggtggtgtctgcagccgtggcccacggggctctggggatgttgcaggccacaggg
agactcttcatggtcactgactactcgcccgagtggtcctaccctgagggaggagtgaag
gtgctcatcactggtccatggcaggaggccagctctaactacagctgcctgtttgatcag
atatctgtccctgcctctctcatccagcctggggtgctacgctgctactgcccagctcat
gacactgggctggtgacactgcaggtgactgccagtaaccagatcatctctaactcagtg
gtgtttgagtacaaagcccgcgctctgccctcactgccctcctcacaacacgactggctc
tcactggacgataaccagttcagaatgtccatcctggagcgcctggagcagatggagcga
cggatggcagagatggcctcccatcaccagcagggcagcggaggaggtgcaggaggagga
gggggagcaggggcaggtggaggaggaggaggtggtggtggtggtcacaacagccagaca
cagtgtgtgtcggggcagggtcaagcgggcagcagctttgagagccgtgtggtggtggtg
tgtgagaagatgatgaaccgggcctgctgggccaagtccaaacacctgatccactccaag
accttcaggggcatgaccctgctccacctggccgctgggcagggctacgccaccctcatc
cagacactcatcaagtggcgcaccaagcatgcagacagcattgacctggagttggaggtc
gatcccctcaatgtggaccacttctcctgcacccctctgatgtgggcgtgtgccctaggt
cacctggaagcggcagtggtcctgtataaatgggaccgacgggccctggccatccctgac
tccttgggacgcctgcccttgtccatcgcccgctcccgcggccacaccaagctggccgag
tgtctggagcagctgcagagagaggaacagcagccccctgcacctctgccacccaccaca
cgcatgtccttctcccccaccccccacgacgctcccacctcagacagctggatggtcaca
tgggccagcgacggcgtgatggcgcccggcgggaagaaaggaggctccaccacggccacc
tcgagcaacctcaacccagacttgagaaggccgcgatctgagccctccaactactacagc
agtgagtgccagcgagacctgcccctggccaagaaacacaagccaaacccagagatgttc
caggcccggcccgacaaggccatgtctgtcccactgagcctggagcagcagcagctacac
aagctgtccttcagccccaagagcctgtcccatgagggcctcagcccagacaagagcctc
tccggtgggggaagtgctggagaatccggaggaaccaagtggcgctccagggagggcttc
tccagtgggggctcaagcaggaagggctcggggggctctgggggcagcagcctgggaaag
gagaagctggctagcaggctgagacagagggaacagctggggaacatgctggtgatagct
gagagagagatggtgagcactgagctgctgtcctacagagaagatctggagaaccaggac
tgtatgacacagatgaatgacctgcaggtgaacatgatgactctggcagagcacatcatt
gaggcgaccccagagaggatcaagagggagaactttgtggccctggacggggtgcccctg
gacagtactggggtcagcaacaccatgagctggttggccagttacctcggagacgtggaa
cagctgcccagcattatacatctacgatctctgtacagtggacctctcgctccgtcctcc
agcccaggggggtctcccctgagggaggggtccatggggaggcccaccctgccccccccg
gccgactggagcgagttcctccaggcctccaacagcaaggtggagagagacctggcccag
ctcaccctgtccgaccccgagcagagggagctgtacgaggccgcccgtctagtccaaact
gccttccgcaagtacaaggggcgcccattcagagatcaacaggaagtagctgcggccgtc
attcagcgttgttacaagaagtacaaacagcttacatggatagccttgaagtatgcactt
tataagaagatgacgcaggccgccattcttatccagagtaagttccgcagctaccaggag
cagaggaagttccagcagagcaggcgggcggccgtgctgatccagcagtactaccgcggc
tacaaggagtttggcaggctcaggccccaccgcagaggagccgccgccgccctggtgcaa
cataaactcagaagtagtctgctctccaagaggcaggatcaggctgccaggaagatcatg
cggtttctacgccgctgccgccacagccccttgatggaccatagactgttcaagcgggtg
agtgcagcctcagcaactcagttcgtccttctctttctctcctcctcgtctacactgtat
gtctctgcctctctctctctaacaatacagttatatatcctgagtccttga
DBGET
integrated database retrieval system
