KEGG   Oncorhynchus mykiss (rainbow trout): 110492209
Entry
110492209         CDS       T07259                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    110492209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110492209
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110492209
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    110492209
SSDB
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-B_box zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_2 zf-UBR zf-RING_10 ANCHR-like_BBOX U-box zf_RING_Vps8
Other DBs
NCBI-GeneID: 110492209
NCBI-ProteinID: XP_021421985
LinkDB
Position
16:50324145..50326821
AA seq 541 aa
MPLSKPKELLEHELSCPICLQLYTDPVYLPCGHNYCLACIQKATDVSGGEKSLPQCPECR
EEYGGTETLQRNFKLCGIIEGYKAVAPADHLKREPLKVRCDHCLDLETLAIKTCLKCEVS
LCARHLQHHTERGSFRTHDLVEPQTELGQRGCAIHGRLLEYFCASDMTSLCANCFIEGTH
QNHDVLTFEAAEEEMRRALEIQSKAVANRLQLTETLLQRAAEDQGTSEAVGNKLLSKSVD
LMDSMAGLVSRYKDRMSLLLEKERGRQRESWQSDLGLLEEQKQQLMEAHQRTTEALTETE
KCLFINRFLLIEPQLREVVTGTVARVPNKVPLNPKRLQASLRMEDFRAEMARLLQSLHVL
LNPLELTFNLSTAHTSLLLSNDLQTVKYSGTKQAYADNPERFSTAPQVLCSQGFTSGEHI
WVVEVGDQSMWSVGLCYKSMPRKGDHSRLGHNPASWRLQWKNKKLTACHASSNVALAEMA
NQPLRVEVALDYEGGTLIFHSTKDRREHLHTFRAVFREAVYPAFSILSTREQSWITLQSG
V
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgcctctgtctaaaccaaaggagctgttagaacatgagctcagctgccctatctgcctg
cagctctacacggatcctgtgtatctgccctgtggccataactactgcctggcctgcatt
cagaaggctacagatgtcagcggtggagagaagagcctgcctcaatgccctgagtgcaga
gaagagtacggcggtacagagacactgcaaaggaacttcaagctctgcggcatcatagaa
ggctacaaggccgttgcgccagcagaccacctgaagagagagccgctgaaggtgcgctgt
gaccactgcctggacttagagacactggccatcaagacctgcctaaagtgtgaggtgtcc
ctgtgtgccaggcacctgcagcaccacactgagagagggtccttcaggacccatgacttg
gtggagccccagactgagctgggccagagaggttgtgccatccacggacgcctgctggag
tacttctgcgccagcgacatgacctctctctgcgccaactgcttcattgagggcacccac
cagaatcatgatgtcctgacgttcgaggcagccgaggaggaaatgaggcgggccctggag
attcagagcaaggcggtggccaacaggctgcagctgacagagaccctgctacagagggct
gctgaggaccagggcacctctgaggctgtgggaaacaagctgctgtccaagtctgtggat
ttgatggacagcatggccggcctggtgagcaggtacaaggacaggatgagcctgctgctg
gaaaaggagagaggccgtcagagggagagctggcagagtgacctggggcttctagaagaa
cagaagcagcagctgatggaggcccaccagcgcaccactgaggccctcacagagacagag
aagtgtctgttcatcaacaggttcctgctaattgagccccagctcagggaggtcgtgacg
ggtaccgtggccagagtgcccaacaaggtccctctgaaccccaaacggctccaggccagc
ctgaggatggaggacttcagggcagagatggctcggctcctccagtctctccacgtcctg
ctaaaccctctggagctgacctttaacctcagcacagcccacaccagcctgctgctctcc
aacgacctgcagacagtcaagtacagcggtaccaagcaggcctacgctgataacccagag
aggttcagtaccgcaccccaggtcctgtgctcccagggcttcaccagtggggagcacatc
tgggtggtggaggtgggcgaccagagcatgtggtcagtgggattgtgctacaagagcatg
cccaggaagggtgaccacagccggctggggcataacccggcctcctggcgtctgcagtgg
aagaacaagaagctgacggcgtgccatgcctcctcaaacgtggcgctggcggagatggcc
aatcagccactgagggtggaggtggctctggactatgaggggggaacactgatcttccac
agcaccaaggaccgtcgggaacatctgcacacgttcagggctgtgttcagagaggctgtg
tatcctgcgttcagcatcctctccaccagagaacagtcctggatcacgctacagagtgga
gtgtaa

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