Oncorhynchus mykiss (rainbow trout): 110492217
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Entry
110492217 CDS
T07259
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110492217 (nphp4)
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
110492217 (nphp4)
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NCBI-GeneID:
110492217
NCBI-ProteinID:
XP_036803073
Ensembl:
ENSOMYG00000040733
UniProt:
A0A8C7TT55
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Position
16:51118978..51310839
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AA seq
1462 aa
AA seq
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MTDDWKGLFERGRVIPPHSQTVRLAQDSSHTHSQGFQIILKHLDGPHIQQEKKEGESEGN
RKREPVKYQLSVSLFDTSHQHFFGRTLKSLPQQMSGVHRAMFNEVVYLHTSLRLPSVVAV
VELVALQPRADGSQHALGCGFAILHLFSSMTEPQATEGDRRLSMYHGTPRTLLHPLVRDP
IEQNKLLRPIDGAHLVCSFKPHPALAPAMHLFPQNMLVSGDENIPGVTPSPTGDSLLKPH
MVKSLTCFLDRLSISLHPSLEKFESQLLQHVSTDCHNTKHSGPESSPVVVIQERRLHVGV
HNGWGFLERPQVVVLETTEATDWSRGRTKGGTSRQGTLTRDCSSSPSQSLALRSSLELKL
PSHQAVGIALQLEYVFSSSLIGDGKLSSTSTISRTAFMQCLRWGVWCPFQEWGALRAEEV
KLSLQGGSTPNPYGIMAYTSSSNSQSPAQEVVDERDMVRFRLSSSSVQKASSSTAVSLRR
SRTGQQRKPPSPSPGQSRRASQASPPGSPQGPGLSMSQLAATSRYPTMSHSTAVSPWQQP
FSSQLYPSPLASAHQLSHVELPAASNITHLEVDLNVSPRDRLPAYQSAALANEGHLELQE
LPFTPIHAPIITMGTHAAPSSSFVSSRSSLAHLYSAGFPNITDPSGLVAEVQDPTEPVNF
DPQREEADPLQGNVLLLQFLAFSRIPQQGGSSNWPDSVHFTFQLYRFPPVTTQRLKLLGI
DKLPKKSSETPPCVLAVINKDGTVNSGSPGLQLQFRVDGAFLQPGERRWFLRYLALHTLQ
VDVWDSQSLLLIGSTALGLKHMLRQGRPAVQATHELEVITTEYMGEGVPVSLHRAPNPIS
VFTTIKGRLHLRLGNVGCPVDQNKPNKPQCLPPSRSHIISPPDATSGFTGGSLSSKSIQR
LSVRNAARAQRLVELDGDLVPLLQSHMKEGGGTPCTNTPWWGETDDVRQRKLNRMVAVRQ
HEGGQDGTGSEVKTKVTGRRAERAQLARDLRLMHAYRERSKAEGITHILSQAITIHHTLY
ATLGTAEYLEYVLRNPFNTPQTVTIYSEDPELSVITDCDEWRYFKTLTKTLTPLEEGMFH
LKEGTLAPQVYLRPKESVHVPLKYQTFVSDNSVVPQGPSLIPSGRSTQVAKKHLSNTVLA
KSIKVTFRAEDGKPLAICQVSVEPTPHVIDQTFRFYQPELSFLKKALRLPSWERMPVGDT
DAGSQISVRCSDPNVICETKMLAQGEPQDVYLKVPGSPSPQIRKFFVTVFTDKWLAVPAQ
VWQVYVHFLQRVDISCVTGQRTCQSLLIRGTQATRKVRCYTSHPQELKVDPAEVFVLLPG
VVQDLQLCVCPLRAGSRFCYLTVVDVEQHTLVACWLLSLTCRLPIVSKAFEMCAPVGGGR
GSTRKITYTNPYPTSRVLLLRSDHPDLLQFKEDSFEIGGGETYRIGLRFAPSQSPGAQEI
LIYINNQEETTEETFCVKVKYT
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgactggaaaggactgtttgagagaggacgggtgattcctccacacagccag
actgttcgactggcacaggactcatcccacacccattctcaaggcttccaaatcatcctg
aagcatcttgatggacctcacattcaacaggagaagaaggaaggggagtcagaagggaat
cgaaagagggaaccagtcaagtaccagctgagtgtttccctgtttgataccagccaccag
cacttcttcgggagaacgttgaagagcttaccccaacagatgagtggtgtccacagggca
atgtttaatgaggtggtgtacctccacacctctctgcgtctgccaagcgtggtggccgtg
gtggagctggtggcgttacagcccagggcagacggctcccagcatgcactggggtgtggc
ttcgccatcctgcaccttttctccagcatgacagaacctcaggccaccgagggggacaga
aggctaagtatgtaccacggaacaccaaggaccctactccatccactagtgagggaccct
atagagcaaaacaagctgttgaggcccatcgatggtgctcatttggtgtgcagctttaag
cctcaccctgctctagcccctgccatgcacctcttcccccagaacatgctggtgtctgga
gatgagaacatccctggggttacgccctcccctacaggagattccctgttgaagccccac
atggtgaagagcctcacctgcttcctggacaggctgtccatctctctgcatccctccctg
gagaagtttgagagccagctgctgcagcatgtcagcacggactgccacaacacgaaacac
tcgggtccagagagctcaccggtggtggtcatccaggagcggaggctccacgtgggggtc
cacaacggctggggcttcttggagcgcccccaggtggtggtgctggagacaaccgaggcc
accgattggagcaggggacgtaccaaagggggcacgtcccgacagggcacactgaccaga
gactgcagctccagtcctagtcagagcctggctctacgtagcagtctggagctcaagctg
cccagtcaccaggctgtggggatcgccctccagcttgagtatgtcttctcctcgtcgctc
attggtgacggaaagctctcctcgacctccacaatctcccggacagccttcatgcagtgc
ctgcgctggggggtgtggtgccccttccaggagtggggtgccctgagggccgaagaagtg
aagcttagtctgcagggcggctctacgcccaacccctatggaatcatggcctatacctct
tcctccaacagccaaagtcctgcccaggaggtggtcgatgagagggacatggtcaggttc
cgtctgtcttccagctcagtgcagaaggcctcgtccagcacagctgtgtctctgaggagg
agcaggacaggacagcagaggaaacctccctcaccctcaccaggtcaaagtcggcgtgcc
tctcaagcatctcctccgggatcgccacaaggcccagggctctctatgtctcagctggca
gctacttcacgctacccgaccatgagccactccactgccgtgtcgccatggcaacagccg
ttttcctctcagctctatccttccccattggcatcggcccaccagctgtcacatgtcgag
ctcccagctgccagcaacatcacccaccttgaggtggacctaaacgtgtcccctagggac
cgcctccctgcataccaatctgccgcgctggccaacgagggccacctggagctccaagag
ctgccgttcacccccatccatgcccccatcatcaccatgggaacacatgctgcgcccagc
tcttcctttgtgagttccaggagctccctggcccacctctactcagccggcttccccaac
atcacagaccccagtgggctggtggctgaagtgcaggacccgacagaaccagtcaacttt
gacccccagagagaggaggcggatcccctgcagggcaatgtgctcctgctgcagtttctg
gcattttccaggataccacagcaagggggtagcagcaactggccagactctgttcatttc
accttccagctctaccgcttcccaccagtgaccacacagcgcctgaaactactgggcatc
gacaagctgccgaagaaatccagcgagacgccaccctgtgtcctggccgtcattaacaag
gatggaacagtcaactctggctccccggggctccagctgcagttccgtgtggacggggca
ttcttgcagccgggtgagagacgctggttcctgcgctacctggccctgcacactctgcag
gtggatgtgtgggacagccaatccctcctgcttatcggctccacagccctggggctcaag
catatgttgcggcagggccgtccagctgtacaggccactcatgagctggaggtcatcacc
acagagtacatgggtgaaggtgtgccggtgagcctgcaccgggcccccaacccgatcagt
gtcttcaccaccatcaaaggtcggctccatctgcgcctgggtaacgtgggatgtcctgta
gaccagaacaaacccaacaagccccagtgtcttcctccgtcacgctcccacatcatctca
ccgccggatgccacaagtggcttcaccgggggcagcttgtcctccaagagcatccaacga
ctcagcgtgcgtaacgcagcgcgggcccagaggctggtggagctggacggggacctggtg
ccgttgctccagagccatatgaaggagggcggtgggacgccctgcactaacaccccctgg
tggggcgagaccgacgacgtacgccagcgcaaactcaatcgcatggtggccgtgcggcag
cacgaggggggacaagatggcaccggcagcgaggtcaagacgaaggtcacgggccgccga
gcagagcgtgcccagttggcgcgggacctgcgcctgatgcatgcctacagggaacgcagt
aaggcagaagggatcacccacatcctgagccaggccatcaccatacaccacaccctctac
gccacgctgggcaccgccgagtacctggagtacgttctccgcaaccccttcaacacccca
cagactgtcaccatctatagcgaagaccccgagctcagtgtcataacggactgtgacgag
tggaggtatttcaagacactgaccaaaaccttaacccccctggaggagggcatgttccac
ctcaaagagggcacgcttgccccccaggtgtacctgcggcccaaggagagtgtgcacgtc
cccctcaaataccagaccttcgtctcagacaactctgtggttccccaggggccgagtctc
atacccagtggcagaagtactcaggtggccaagaaacatctgtccaatactgtgctggcc
aagtcaatcaaggtgacattcagggcagaggatggtaagccgctggccatctgccaggtg
agcgtggagcccacccctcacgtcattgaccagacattccgcttctaccagccagagttg
tcctttctgaagaaggccctgcgccttccctcctgggagagaatgccagttggagacaca
gatgctgggtctcagatctcagtgcgctgcagtgaccccaacgtcatctgtgaaacaaag
atgttggcacaaggggagcctcaagatgtgtatttaaaagtgccgggcagtccgagccct
caaatccgaaagttcttcgtcacagtgttcactgataagtggctggcggtgcccgcccaa
gtctggcaagtatatgtgcacttcctgcaacgggtggatatcagctgtgtgactggccag
cggacctgtcaatcactgctgatacggggcacccaagccacccggaaggtccggtgttac
acctcgcacccacaggagctcaaggtggacccagcggaggtgtttgtcctcctcccgggt
gtggtacaggacctgcagctgtgtgtgtgtccgttgcgggcgggcagccgcttctgctac
ctcaccgtggtggacgtggagcaacacacgctggtggcctgctggctcctcagcctcacc
tgtcgcctgcccatcgtctccaaggcttttgaaatgtgtgcacctgtgggagggggtcgg
gggagcacacggaagatcacttacaccaacccctaccccaccagccgtgtcctcttgcta
cggtcagaccaccctgacctgctccagtttaaagaggacagttttgagattgggggaggg
gagacctaccgcatcgggctgcggttcgctcccagccaaagtcctggtgctcaggagatc
ctcatctacatcaacaaccaggaggagaccacggaggagaccttctgtgtgaaagtgaaa
tacacctga
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