KEGG   Oncorhynchus mykiss (rainbow trout): 110492217
Entry
110492217         CDS       T07259                                 
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
  KO
K16478  nephrocystin-4
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:omy03037]
    110492217 (nphp4)
Cilium and associated proteins [BR:omy03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   110492217 (nphp4)
SSDB
Other DBs
NCBI-GeneID: 110492217
NCBI-ProteinID: XP_036803073
Ensembl: ENSOMYG00000040733
UniProt: A0A8C7TT55
LinkDB
Position
16:51118978..51310839
AA seq 1462 aa
MTDDWKGLFERGRVIPPHSQTVRLAQDSSHTHSQGFQIILKHLDGPHIQQEKKEGESEGN
RKREPVKYQLSVSLFDTSHQHFFGRTLKSLPQQMSGVHRAMFNEVVYLHTSLRLPSVVAV
VELVALQPRADGSQHALGCGFAILHLFSSMTEPQATEGDRRLSMYHGTPRTLLHPLVRDP
IEQNKLLRPIDGAHLVCSFKPHPALAPAMHLFPQNMLVSGDENIPGVTPSPTGDSLLKPH
MVKSLTCFLDRLSISLHPSLEKFESQLLQHVSTDCHNTKHSGPESSPVVVIQERRLHVGV
HNGWGFLERPQVVVLETTEATDWSRGRTKGGTSRQGTLTRDCSSSPSQSLALRSSLELKL
PSHQAVGIALQLEYVFSSSLIGDGKLSSTSTISRTAFMQCLRWGVWCPFQEWGALRAEEV
KLSLQGGSTPNPYGIMAYTSSSNSQSPAQEVVDERDMVRFRLSSSSVQKASSSTAVSLRR
SRTGQQRKPPSPSPGQSRRASQASPPGSPQGPGLSMSQLAATSRYPTMSHSTAVSPWQQP
FSSQLYPSPLASAHQLSHVELPAASNITHLEVDLNVSPRDRLPAYQSAALANEGHLELQE
LPFTPIHAPIITMGTHAAPSSSFVSSRSSLAHLYSAGFPNITDPSGLVAEVQDPTEPVNF
DPQREEADPLQGNVLLLQFLAFSRIPQQGGSSNWPDSVHFTFQLYRFPPVTTQRLKLLGI
DKLPKKSSETPPCVLAVINKDGTVNSGSPGLQLQFRVDGAFLQPGERRWFLRYLALHTLQ
VDVWDSQSLLLIGSTALGLKHMLRQGRPAVQATHELEVITTEYMGEGVPVSLHRAPNPIS
VFTTIKGRLHLRLGNVGCPVDQNKPNKPQCLPPSRSHIISPPDATSGFTGGSLSSKSIQR
LSVRNAARAQRLVELDGDLVPLLQSHMKEGGGTPCTNTPWWGETDDVRQRKLNRMVAVRQ
HEGGQDGTGSEVKTKVTGRRAERAQLARDLRLMHAYRERSKAEGITHILSQAITIHHTLY
ATLGTAEYLEYVLRNPFNTPQTVTIYSEDPELSVITDCDEWRYFKTLTKTLTPLEEGMFH
LKEGTLAPQVYLRPKESVHVPLKYQTFVSDNSVVPQGPSLIPSGRSTQVAKKHLSNTVLA
KSIKVTFRAEDGKPLAICQVSVEPTPHVIDQTFRFYQPELSFLKKALRLPSWERMPVGDT
DAGSQISVRCSDPNVICETKMLAQGEPQDVYLKVPGSPSPQIRKFFVTVFTDKWLAVPAQ
VWQVYVHFLQRVDISCVTGQRTCQSLLIRGTQATRKVRCYTSHPQELKVDPAEVFVLLPG
VVQDLQLCVCPLRAGSRFCYLTVVDVEQHTLVACWLLSLTCRLPIVSKAFEMCAPVGGGR
GSTRKITYTNPYPTSRVLLLRSDHPDLLQFKEDSFEIGGGETYRIGLRFAPSQSPGAQEI
LIYINNQEETTEETFCVKVKYT
NT seq 4389 nt   +upstreamnt  +downstreamnt
atgaccgacgactggaaaggactgtttgagagaggacgggtgattcctccacacagccag
actgttcgactggcacaggactcatcccacacccattctcaaggcttccaaatcatcctg
aagcatcttgatggacctcacattcaacaggagaagaaggaaggggagtcagaagggaat
cgaaagagggaaccagtcaagtaccagctgagtgtttccctgtttgataccagccaccag
cacttcttcgggagaacgttgaagagcttaccccaacagatgagtggtgtccacagggca
atgtttaatgaggtggtgtacctccacacctctctgcgtctgccaagcgtggtggccgtg
gtggagctggtggcgttacagcccagggcagacggctcccagcatgcactggggtgtggc
ttcgccatcctgcaccttttctccagcatgacagaacctcaggccaccgagggggacaga
aggctaagtatgtaccacggaacaccaaggaccctactccatccactagtgagggaccct
atagagcaaaacaagctgttgaggcccatcgatggtgctcatttggtgtgcagctttaag
cctcaccctgctctagcccctgccatgcacctcttcccccagaacatgctggtgtctgga
gatgagaacatccctggggttacgccctcccctacaggagattccctgttgaagccccac
atggtgaagagcctcacctgcttcctggacaggctgtccatctctctgcatccctccctg
gagaagtttgagagccagctgctgcagcatgtcagcacggactgccacaacacgaaacac
tcgggtccagagagctcaccggtggtggtcatccaggagcggaggctccacgtgggggtc
cacaacggctggggcttcttggagcgcccccaggtggtggtgctggagacaaccgaggcc
accgattggagcaggggacgtaccaaagggggcacgtcccgacagggcacactgaccaga
gactgcagctccagtcctagtcagagcctggctctacgtagcagtctggagctcaagctg
cccagtcaccaggctgtggggatcgccctccagcttgagtatgtcttctcctcgtcgctc
attggtgacggaaagctctcctcgacctccacaatctcccggacagccttcatgcagtgc
ctgcgctggggggtgtggtgccccttccaggagtggggtgccctgagggccgaagaagtg
aagcttagtctgcagggcggctctacgcccaacccctatggaatcatggcctatacctct
tcctccaacagccaaagtcctgcccaggaggtggtcgatgagagggacatggtcaggttc
cgtctgtcttccagctcagtgcagaaggcctcgtccagcacagctgtgtctctgaggagg
agcaggacaggacagcagaggaaacctccctcaccctcaccaggtcaaagtcggcgtgcc
tctcaagcatctcctccgggatcgccacaaggcccagggctctctatgtctcagctggca
gctacttcacgctacccgaccatgagccactccactgccgtgtcgccatggcaacagccg
ttttcctctcagctctatccttccccattggcatcggcccaccagctgtcacatgtcgag
ctcccagctgccagcaacatcacccaccttgaggtggacctaaacgtgtcccctagggac
cgcctccctgcataccaatctgccgcgctggccaacgagggccacctggagctccaagag
ctgccgttcacccccatccatgcccccatcatcaccatgggaacacatgctgcgcccagc
tcttcctttgtgagttccaggagctccctggcccacctctactcagccggcttccccaac
atcacagaccccagtgggctggtggctgaagtgcaggacccgacagaaccagtcaacttt
gacccccagagagaggaggcggatcccctgcagggcaatgtgctcctgctgcagtttctg
gcattttccaggataccacagcaagggggtagcagcaactggccagactctgttcatttc
accttccagctctaccgcttcccaccagtgaccacacagcgcctgaaactactgggcatc
gacaagctgccgaagaaatccagcgagacgccaccctgtgtcctggccgtcattaacaag
gatggaacagtcaactctggctccccggggctccagctgcagttccgtgtggacggggca
ttcttgcagccgggtgagagacgctggttcctgcgctacctggccctgcacactctgcag
gtggatgtgtgggacagccaatccctcctgcttatcggctccacagccctggggctcaag
catatgttgcggcagggccgtccagctgtacaggccactcatgagctggaggtcatcacc
acagagtacatgggtgaaggtgtgccggtgagcctgcaccgggcccccaacccgatcagt
gtcttcaccaccatcaaaggtcggctccatctgcgcctgggtaacgtgggatgtcctgta
gaccagaacaaacccaacaagccccagtgtcttcctccgtcacgctcccacatcatctca
ccgccggatgccacaagtggcttcaccgggggcagcttgtcctccaagagcatccaacga
ctcagcgtgcgtaacgcagcgcgggcccagaggctggtggagctggacggggacctggtg
ccgttgctccagagccatatgaaggagggcggtgggacgccctgcactaacaccccctgg
tggggcgagaccgacgacgtacgccagcgcaaactcaatcgcatggtggccgtgcggcag
cacgaggggggacaagatggcaccggcagcgaggtcaagacgaaggtcacgggccgccga
gcagagcgtgcccagttggcgcgggacctgcgcctgatgcatgcctacagggaacgcagt
aaggcagaagggatcacccacatcctgagccaggccatcaccatacaccacaccctctac
gccacgctgggcaccgccgagtacctggagtacgttctccgcaaccccttcaacacccca
cagactgtcaccatctatagcgaagaccccgagctcagtgtcataacggactgtgacgag
tggaggtatttcaagacactgaccaaaaccttaacccccctggaggagggcatgttccac
ctcaaagagggcacgcttgccccccaggtgtacctgcggcccaaggagagtgtgcacgtc
cccctcaaataccagaccttcgtctcagacaactctgtggttccccaggggccgagtctc
atacccagtggcagaagtactcaggtggccaagaaacatctgtccaatactgtgctggcc
aagtcaatcaaggtgacattcagggcagaggatggtaagccgctggccatctgccaggtg
agcgtggagcccacccctcacgtcattgaccagacattccgcttctaccagccagagttg
tcctttctgaagaaggccctgcgccttccctcctgggagagaatgccagttggagacaca
gatgctgggtctcagatctcagtgcgctgcagtgaccccaacgtcatctgtgaaacaaag
atgttggcacaaggggagcctcaagatgtgtatttaaaagtgccgggcagtccgagccct
caaatccgaaagttcttcgtcacagtgttcactgataagtggctggcggtgcccgcccaa
gtctggcaagtatatgtgcacttcctgcaacgggtggatatcagctgtgtgactggccag
cggacctgtcaatcactgctgatacggggcacccaagccacccggaaggtccggtgttac
acctcgcacccacaggagctcaaggtggacccagcggaggtgtttgtcctcctcccgggt
gtggtacaggacctgcagctgtgtgtgtgtccgttgcgggcgggcagccgcttctgctac
ctcaccgtggtggacgtggagcaacacacgctggtggcctgctggctcctcagcctcacc
tgtcgcctgcccatcgtctccaaggcttttgaaatgtgtgcacctgtgggagggggtcgg
gggagcacacggaagatcacttacaccaacccctaccccaccagccgtgtcctcttgcta
cggtcagaccaccctgacctgctccagtttaaagaggacagttttgagattgggggaggg
gagacctaccgcatcgggctgcggttcgctcccagccaaagtcctggtgctcaggagatc
ctcatctacatcaacaaccaggaggagaccacggaggagaccttctgtgtgaaagtgaaa
tacacctga

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