Oncorhynchus mykiss (rainbow trout): 110492256
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Entry
110492256 CDS
T07259
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110492256 (ddx49)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110492256 (ddx49)
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
90S particles
Helicases
110492256 (ddx49)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
110492256
NCBI-ProteinID:
XP_021422139
Ensembl:
ENSOMYG00000000821
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All DBs
Position
1:16875696..16885634
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AA seq
477 aa
AA seq
DB search
MSDFSSLGLSDWLIQQCKQMGISKPTQVQENCMPPILEGRDCMGCAKTGSGKTAAFVLPV
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPMGLRDCIIVGGMDMITQALELSKK
PHVVVATPGRLADHIRSSDTFSIKKIQFLILDEADRLLEQGCTDFTKDLEVILAAVPVKR
QTLLFSATLTDTLQELKGIAMNKPFFWESKSEVRTVEELDQRYILTPEKVKDAYLVHLIQ
KFQDEHDDWSIMIFTNTCKNCQILTMMMQKFNFPTISLHSMMKQKQRFANLAKFKSSVFK
ILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRHGVSITLVTQYDIHLV
HSIEGQIQAKLKEYPVEEKEVLKILTQVNVARRECEIKLESTDFDEKKEINKRKQMILEG
KDPDVEAKRKAELEKIRSEKKLFKERIQETIQKKQHGMQKKLMKQKHIQKEKAVKST
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttttcctctctcggtctgtcagattggctgattcaacaatgtaaacaaatg
gggatcagtaaaccaactcaagtccaggaaaactgtatgccaccgattctggaaggtcgg
gattgtatgggttgtgccaagactggcagtggaaagacagctgcctttgtgctaccagtg
ctacagaaattatctgaggacccatatggaatcttctgtttagttctcacacctaccagg
gaattggcttaccagattgctgaacagtttagagtcctgggaaaaccaatgggcttgcgg
gactgcatcattgttggtggaatggatatgatcacacaggccttggagctctctaagaag
ccacacgtcgttgtagccactccaggaagactggcagaccacattcggagctccgacaca
ttcagcatcaagaagatccagtttctgatccttgatgaggccgaccgcctgcttgagcaa
ggctgcacagacttcaccaaagacttggaggtgatcctggccgcggtgcctgtcaaacgc
cagacgctgcttttcagtgccaccctcacagacacactacaggagctcaagggcatcgcc
atgaacaagcccttcttctgggaaagcaagtccgaggtccgcacggtagaggagttggat
caaaggtacatcctgacaccagagaaagtgaaagatgcctacctagtgcacctgatccag
aagtttcaagatgagcacgacgactggtcgatcatgatcttcaccaacacctgcaaaaat
tgccaaatcctcacaatgatgatgcagaaattcaactttccaaccatctccttgcattca
atgatgaagcagaaacaacgtttcgccaacctcgcgaagttcaagtccagtgtctttaaa
atcctgattgcaactgatgtggcttccagaggtctagatattccaacagtccaggttgtc
atcaaccacaacacgccaggtctgcccaagatctacattcacagagtcggccgaactgcc
agagcaggaaggcatggtgtctcgatcacactggtgacacagtatgacatccacttggtt
cattccattgagggacagatccaggccaaactgaaagaatatccagtggaggagaaagag
gttctgaagatcctcactcaagtcaacgtggccagacgggagtgtgaaattaaacttgag
tcaacggattttgatgagaaaaaggagatcaacaagagaaaacagatgattttggagggg
aaagatccagacgtggaggcaaagagaaaggctgaactggagaagataaggagtgagaag
aagttgttcaaggagaggatacaggaaacaattcagaagaaacaacatgggatgcagaag
aaactgatgaagcaaaaacacattcaaaaggaaaaggcagtgaagtccacataa
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