Oncorhynchus mykiss (rainbow trout): 110492338
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Entry
110492338 CDS
T07259
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110492338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110492338
03036 Chromosome and associated proteins [BR:
omy03036
]
110492338
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
110492338
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110492338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
110492338
NCBI-ProteinID:
XP_021422242
Ensembl:
ENSOMYG00000042722
UniProt:
A0A8C7UEA0
LinkDB
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Position
16:complement(55609187..55626735)
Genome browser
AA seq
824 aa
AA seq
DB search
MSAKVELDVSAKEADPNPSSDALSSNDSLSKKTHPQTTALILPAPVPSTQKVEVSPGAAE
AGNGATAGEVETPTIAPQVGGACSIVHVLEWKEGMAILPSSNLKFCLSDCGTLEMISQEK
ISSAEPAVMVSGKIPDSKNRPTNKTDMVSPLSSVGGVAVEQERPIKIEPKTQGGPGQQES
CDPMAQRTYPEQLRREPMTDKRGGGTDKIPGGRVASLDPELLKPMKKRKRKDYLSPSEEE
SELDGMDYLKTENRHNKAGAVEVHMDLWTWGQYLEETKAVAAPAKLFQESQRVPQCKSSF
RQGMKLEGIDPQHPSMYFVLTVAEVCGYRLRLHFDGYSDCHDFWVNANCPDIHPAGWCES
TGHKLYTPKGCKEEEFSWASYLKMSKAQVAPKEVFASPGRTDTECGFEVGMKLEAVDRMN
PSLICVATVTDVVDDRFLVHFDNWDDTYDYWCDASSPYIHPIGWCQERSLPLTPPQDYPD
PGRFSWPRYLDETGSTAVSAEAFKVRPAHCFQAQMKLEVVDKRSPGLIRVATVEEVDTHR
IKIHFDGWSHMYDEWMDSDHPDTHPVGWCESTGHPLKIPPPESNKTQQLDPREPATTGQS
SFSSMPCKVINHSRSTKYSFHHRKCPTPGCDGSGHVTGRFTAHHCLSGCPLAERNQGRLK
TDLSDTEGSGAKRNILIFGQRTKKSRYHGRIGRPPKYRKSQHRGYQTIATEGMCPSLFMS
ALSAHPDRTLSLCWEQHCKLLPGVQGIHATQVAAWTVEEVFGFVQKLTGCEEQACVFKEE
MIDGEAFLLLTQTDIVKILNIKLGPALKISNAILMFKSIDEGLK
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaaagtggagctggatgtttcagccaaagaagcagatcccaatccttccagt
gatgccctctcctccaatgacagcctgtcgaagaagacacacccacagaccacagcactc
atcctgccagctcctgttcccagtacacagaaggtggaggtctctccgggtgctgctgag
gcaggtaatggagccactgctggagaggtggaaacccccactatagccccccaggttggg
ggagcctgtagcatcgtccatgtactggagtggaaagaagggatggccatcttacccagc
agcaaccttaagttctgtctgagtgactgtggaacactggagatgatcagccaagaaaaa
atcagcagtgctgaaccagcagtaatggtgtctgggaaaatacctgactccaaaaacagg
ccaactaacaaaacagatatggtgtctcctctcagctctgtgggtggtgtggctgtggaa
caagagaggcccatcaagattgagcctaagacccagggagggccaggacaacaggagagc
tgtgatcctatggcacagagaacctacccagagcagctacgcagggagcctatgactgac
aagagggggggaggcacagataagattcccgggggcagggtagcatctctggaccctgag
ctgctgaaacccatgaagaagaggaagaggaaggactacctgagtccgtcagaggaagaa
tctgagctggatggaatggattacttgaagacagaaaacagacacaacaaagcaggtgct
gttgaagtccatatggatctgtggacatggggacagtatctggaggagaccaaagcagtg
gcagctccggccaaactctttcaagagtctcagagagtacctcagtgcaaaagcagcttc
cgccagggcatgaagttagagggcatcgacccccagcacccctccatgtactttgttctg
actgtggctgaggtttgtggctacaggctgcgtctccattttgacggctactcagactgt
catgacttctgggtaaatgccaactgccccgacatccacccggcgggatggtgtgagagc
actggacacaaactctacacccccaaaggctgcaaagaggaggagttctcctgggccagc
tacctgaaaatgagtaaagcacaagttgcccctaaagaggtgtttgccagccctggaaga
acggatacggagtgtggttttgaggtgggcatgaagctggaggcggttgaccgcatgaac
ccctctctcatttgcgtggcgaccgtgaccgacgtggtggacgaccgcttcctggttcac
tttgataactgggacgacacgtatgactactggtgtgatgccagcagtccatacatccat
cctattggctggtgccaagagaggagcctccccctaacgccgcctcaagattacccagac
ccaggcaggttctcctggccaaggtacctcgacgagactggctctaccgccgtgtctgct
gaggcttttaaagtgcgtcctgcccattgcttccaggctcagatgaagctggaggtggtg
gacaaaaggagccccggcctgatacgggtggccacagtggaggaggtcgacacccaccgc
attaagatccattttgatggctggagtcatatgtatgatgagtggatggactcggaccac
cctgacacccacccggtcggctggtgtgagagtacgggtcacccgctaaaaatccctccc
cctgagtccaacaaaacccaacagcttgaccccagggaacctgcaaccacaggccagtcc
agtttctcctccatgccttgcaaagtaatcaaccactccagatccacaaagtacagcttc
catcacaggaagtgtccaacgcctggatgtgatggctcgggtcatgtgactgggcggttc
acagcgcatcactgtctgtcaggctgcccattggctgagcgaaaccagggcagactcaaa
accgacctatcagatacagaggggagcggagccaagcggaacatcttaatctttggccaa
aggaccaaaaagtcccggtaccatggcaggattggtcgtccccccaagtatagaaaaagc
cagcacagaggttaccagacgatagccacagagggtatgtgcccgtctctgttcatgtct
gccctgtcggcccacccggaccgaaccctgtctctgtgctgggagcaacactgcaaactg
ctgccaggcgtccagggcatccatgctacacaggtggcagcatggaccgtggaggaggtc
tttggatttgtccagaaactgactggttgtgaagaacaggcctgtgtcttcaaagaggaa
atgattgacggggaggccttcctattactgacacaaactgacatcgtcaaaatcctgaac
atcaaacttggtcccgccctcaagatctccaacgccattttaatgttcaagagtattgac
gaaggcctcaagtga
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