Oncorhynchus mykiss (rainbow trout): 110492357
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Entry
110492357 CDS
T07259
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110492357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110492357
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
110492357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
110492357
NCBI-ProteinID:
XP_021422272
Ensembl:
ENSOMYG00000043112
UniProt:
A0A8C7UHV5
LinkDB
All DBs
Position
16:55908677..55920388
Genome browser
AA seq
1549 aa
AA seq
DB search
MEIWPCGNPNPIKVLQSSFYKMMGGSESGSGDKDGVHTVAIQVPIGWQRRAKDGLVVYVS
PSGAVLSSLEDVKSYLLTDGTCKCGLECPLVIHKVFNFSLGVKIQQHSQPVGKAEQDMTK
LCNHRRKVVAMAALCRSMQASQLPYVARHTEVTSGIMENRDPKRMRVDREEKECGTYTSK
HHLVQSRPNNNLHPNSCGSPKNSPQLVYSYNGSSPLSHNSTNSYHTPDILRRLPPPLNLP
PNTSPFSSYGAPQRSLRTPTPQNLSQGQRAPQTPEALRSPHMGPLSPPHPSSPGTLGRGG
QSHQHGIIVGSPLSPSCSPSPSVSMNCPSPRQRSRHPSASSAHSEQGVGGVVLGGYPPRR
ISSSSSHSPIPGGSPILHFSKYKLEDILEQFKNSGNSSTNNHILHPNSLSNQNNPHILSL
ALEKVGRPTKAPASASGMEISAGPSGLPLGKFLNHQKQPHPASFPASSLLSAAAKAQLAS
QMTHNQSSNSRNILNSALSLEVSRESKQLKVTNSTLHNSLPSIARPLSAASPLLSLSQPL
ASSPLHLSRTDRTSHRKRQRRSPTVLSMLKESQMTGPRTPGDVLNLSSHSQPSSTSASPY
PAMLENHLQALRLSVRHSGTLAGPQKQPDGALDFTTIMAGQPDPPTQPLSALLHLLSVQN
AQATGAQPGSGHCTGGMRQSPRQSPSPSHLNIRPFPVQSPTNHSTTQGPSQPLSPSQSKS
RRGNAQSPSRPHTRTSPKQRRSPSMALSNAQSAQYCSSPSPTPHTPNRLWQAQNQPMDAT
TIQSPIGQAFPEVSESMEMESMSTLGPGLNSTSTSNHSSSVTSYSSTTSPRPLDLSNHML
ALLAASSTTPLGEGGLDRTTGNNTTGVQEPQSVDLQGSTVTKPPGGCSPQTLGDSTCSLP
LAEAFPFMSQEQLLQLLSATAGLPSLLDPTILGSLPLGLWIGGQQGHLPISNTPQQHHQL
PDQQLLQQSEQQLLLQHEQQQKQHQTAHLNHNFPFSLFPCLMGGQGELPLNLLGLLNPLL
PPSAAPTPGQECDLGMGEKLGIQALLMASLLLGQQQTAMLPLSGLGQLSLDLPFRQHIPA
LLDGLSLDKGSGLLDPSSLPGPGLLEALQGLLPPADGPLQALQSLLLSTPLPPPAFLSLS
PDLLTAALGSTGLPPAPHLPLTQQPQQPPPQVSTSGHDGGMETLIPLSVQGKDNPVLHQL
LPTLLNPGVLGDLSALTSLHSLLGLGAGPLFLPPVQASALGMPLLQGPDGAINLLNNIQL
NMAPPSEGEKPISLQETDSSSLQEDIPANRLTPETAPSPCPALAPVSQRGEGSVVSVLDP
YASFMDTIYTSFLQVSAKEQEAVQSGPDAFGALPPSYPGERRSPSALLPQVSAPLSLSPR
QACTLRNPDLSRLNMEAAHSPAQGTPKPSNDGSNTPLQNKLEFPECHTNPPLLPIYLEEA
KTDSYSQAVSDRQGDRPQAGGYQSPRDGSSCPKEETGGLQHTEQGRNQTAQMGGARRGRK
RKQTLQNVLEDFRELDSPALEEPKPRVVLLKPERSVRGRRRRGARSQRQ
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatggccgtgtgggaaccccaaccctataaaggtgctgcaaagcagtttttac
aaaatgatgggaggcagtgagagtggcagtggagacaaggatggagttcacactgtggca
atacaagtccccattggctggcagaggagagcgaaggacgggcttgtggtgtatgtcagt
ccaagtggcgcagtcctgtcctcactggaagatgttaagtcatatctgttgaccgatggc
acatgcaagtgtggcctcgagtgtccgctggtcatccacaaggtgtttaactttagccta
ggggtcaaaattcaacagcacagccagccggtggggaaggcagagcaggacatgacaaag
ctctgtaaccatcggaggaaagtggttgccatggcagcgctctgtcgcagtatgcaggct
tcacaactgccctatgttgcccgtcacacagaggtcaccagtggcattatggagaacaga
gatcctaagaggatgagagtggacagggaagaaaaagaatgtggcacttacacctccaaa
caccatctagtccagtccaggcccaacaataacctccaccccaactcttgtggcagtcct
aaaaattctccccaacttgtgtattcttacaatggctcctcgcccctctcacacaatagc
actaactcttatcacacgcctgatattttgaggagactgccacctcctctcaatctcccc
cccaacacctctccattctccagctatggggcacctcagaggtccctacgcacaccaacg
cctcagaatctcagtcagggtcagagggcaccacagactccagaagccctcagatctcct
catatggggcccctctctccccctcatccctcctcccctgggacactggggaggggaggg
cagagtcatcaacatggtatcatcgttgggtctcccctgtccccctcatgttccccctct
ccctctgtgagtatgaactgcccctctccccgccagcgctcacgccacccctccgcctct
tctgctcactctgagcagggggtgggaggggtggtgcttgggggctacccccccagaagg
atatcctcttcctcctcacactctcctataccaggggggtcccctatcctccatttctca
aaatacaagcttgaggacatcttagagcagtttaagaactctggcaacagtagcactaat
aatcacatccttcacccaaactcactgagcaaccaaaacaatcctcatatcctctctcta
gctcttgaaaaggttgggaggcccacaaaggcacctgcttctgcctcaggcatggagatc
agtgctggtccttctggtttgcctcttggaaagttcttgaaccaccagaagcaaccccac
ccagcttcttttcctgccagtagtctcctctcggcagcagccaaggcccagctggccagc
cagatgactcacaaccagagctccaattcgcgcaacatcctcaactcagccctctctttg
gaagtctcgagggagtctaagcaattgaaggtaacaaacagcactttacacaacagcctt
ccctcaatcgctaggcccctgtctgcagcctcccccctgctttccctctcccagccccta
gcctccagtccccttcacctctcccgtacggaccggacatcccacaggaagcggcagcgg
cgttcgcccacagtgctcagcatgctgaaggagtcccagatgaccggtcccagaaccccc
ggcgacgtgctcaacctctcctcgcactctcaaccctcctctacctcagcctcgccttac
cccgccatgttagagaaccacctccaggccctaaggctctcagtccggcactctggcaca
ctcgcagggccccagaagcagcctgacggcgccctggatttcacaacaatcatggcaggt
caaccggatccccccacccagcctctctctgctctgcttcacctgctcagtgtgcagaac
gctcaagccactggagcgcagcccggctctggacactgcacaggaggcatgaggcagagc
cccaggcagtctccctcgccctcccatttaaacatcagaccattccccgtgcagtccccc
actaatcacagtaccacacaaggcccatcacagcccctctctccctctcagtcaaagtcc
aggcgaggtaatgcacagtctccgtctcgaccacatacgaggactagtcccaaacagaga
cggtctccttccatggccctgtccaacgctcagtcagcacaatattgcagtagcccctcg
cccaccccacacacccctaataggctgtggcaggcccaaaaccaacctatggatgccacc
accatccagtcacccattggccaggcctttcctgaagtcagtgaatcaatggagatggag
agcatgtcaacactaggccctggtctcaacagcacctccacctccaaccatagcagcagc
gtcaccagctacagcagcaccacctcccccagacccctggatctcagtaaccacatgctg
gcactgctggcagcctcttccaccacacctcttggggaggggggcctggacagaaccacc
ggcaacaacactacaggggtgcaagagcctcagagtgttgatcttcagggctccacagtg
accaaacccccgggaggctgcagcccccagaccctgggggactccacttgctccttaccc
ctggctgaagccttccccttcatgagtcaggagcagcttctccagcttctatctgccacg
gccggcctgccctccctcctggaccccaccatcctgggctctctgcccctgggcctgtgg
attggcggtcagcagggtcacctccccatctccaacacacctcagcaacaccatcaactg
cccgatcaacaactactacaacaatcagaacaacaactactgttacagcatgagcaacag
cagaaacaacaccagactgcccatctgaaccacaactttccatttagcttattcccctgt
ctaatgggaggtcagggagagctgcctctgaatctcctgggtctgttgaacccactgcta
cccccttctgctgcccctaccccaggccaggagtgtgatctggggatgggggagaaactg
ggcatccaggctctcctcatggcctccctgctactaggccagcagcagactgccatgttg
cccctgtctgggcttggccagctgagcctggacctccccttccggcagcacatcccagcc
ctgttggacggtttgtctctggataaagggtctggactcctggacccgtcatccctcccc
ggccctgggctccttgaggccctccagggcctgcttccccccgccgatgggcccctccag
gccctgcagtcgctcctgctctccacccccctgcctcccccggccttcctttccctcagc
cctgatctgctaactgctgccctgggctctactggcctcccgcctgcccctcatctcccc
ctaacacagcaaccccaacaacccccacctcaggtctcaacttcaggccatgatgggggg
atggaaactctaatccccctgtctgtccagggaaaggacaaccctgtcctccaccagtta
ctgcctactctcctcaacccaggggttctaggagacctgtctgctctgaccagcctccac
agtcttctggggctaggtgcaggccctctcttcctgccccccgtacaggcctctgccttg
ggcatgcctctgctccagggccctgatggggccatcaacctcctcaacaacatccagctc
aacatggcaccaccctcagagggagaaaagccaatctccttacaggaaacagacagctcc
tcccttcaggaggatattccagccaatcggcttaccccagagactgcgcccagcccctgt
cccgccctggcccccgtgtcccagcgtggagagggctccgtggtgagcgtcctggacccc
tacgcttccttcatggacactatctacacctccttcctccaggtcagtgctaaagagcag
gaagcagttcagtctgggccggatgccttcggtgccttaccgccctcctaccctggggag
cgtcgttccccctccgctctcctccctcaggtcagtgcccccctctccctgagccctcgg
caggcctgcaccctgaggaacccggacctgtcccggctcaatatggaggcagcccactcc
ccggctcagggcacccctaaacccagcaacgatggctccaacacgcccctgcagaacaag
ttggagttcccagagtgtcacactaaccctcctctgcttcccatctacctggaggaagcc
aagacagactcgtacagccaggctgtgtccgatcggcagggggacagaccccaggcagga
gggtaccagagtcccagagacgggagcagctgccccaaggaggagactgggggtctacag
cacacggagcagggcaggaaccaaactgcacaaatggggggagccagaagaggcaggaaa
aggaaacaaacgctacagaatgtgctagaggacttcagagaactggattctccagcccta
gaggaacctaaacccagggtggtgctgctgaagcctgagaggtcggtccggggcaggagg
cggcggggagccaggtcccagagacagtga
DBGET
integrated database retrieval system
