Oncorhynchus mykiss (rainbow trout): 110492470
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Entry
110492470 CDS
T07259
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110492470
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
General mRNP proteins
110492470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
CDC45
Motif
Other DBs
NCBI-GeneID:
110492470
NCBI-ProteinID:
XP_021422492
Ensembl:
ENSOMYG00000036993
UniProt:
A0A8C7WAI5
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All DBs
Position
16:60630834..60642233
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AA seq
546 aa
AA seq
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MADDFDIEAMLEAPYRKDEIKSSSANGHEERSSKKKKRSHSRSSRSPSSDKRRSKSKDRK
KSRDRKRSKSREKKRSRSKERRRSGSHSRERAGRYRGRRSPFLGPKFNGGPGGKIGPPHA
NKLSRRRSRSRSPFKKDKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVG
KVRDVRMISDRNSRRSKGIAYIEFLEANSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAA
MANNLQKGNAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFIS
FADAECAKKALEQLNGFELAGRPMKVGNVTERTDSSTASSFLDNDELERTGIDLGTTGRL
QLMARLAEGTGLQIPPAAQQALQMSGSMHSSSIHFGNMAAGTDIQARLNPPPEAVANPAL
NLGPSMNQAMNLPTQPLATHCLQLSNMFSPQSENEPGWDIEIQDDVMEECNKHGGIVHIY
VDKNSPQGNVYVKCPTIPTAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQL
LMPSRR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattttgacattgaggctatgctagaggctccatacagaaaggatgagatc
aagtcctctagcgctaatggacatgaggagcgcagtagtaagaagaaaaagaggagccac
agtaggagtagtcggagcccgagctctgacaagcgcagaagcaagagcaaagacaggaag
aagagccgggacaggaagaggagcaagagtcgggagaagaaacgcagccgcagtaaggag
cgccgccgcagcggctcccatagcagggagcgtgccgggcgctacagaggacgccgcagc
ccctttttggggccgaaatttaacggtggtccaggagggaagattggcccaccacatgcc
aacaaactaagtcgtaggcgctcaagaagtcgtagtcccttcaagaaagacaagagtcca
gtaaggcaaccaattgacaacctgaccccagaggagagggatgcccgtactgtgttctgt
atgcagctggcagccagaatcagaccacgagatctagaggacttcttctctgctgttggg
aaagtgagagacgtgaggatgatctccgatagaaactccaggaggtcaaagggcattgcc
tacattgagtttctggaggcgaattcggtcccattggccattggcttgactggacagaga
cttcttggagtgcccatcattgtccaggcctctcaggctgagaagaacagagcagcagca
atggccaacaaccttcagaagggtaatgctggccccatgcggctgtacgtgggctctctg
cacttcaacatcacagaggacatgctgcgaggcatcttcgagcctttcggaaggattgag
agcatacagctgatgatggacagtgaaactgcacgatccaaaggatatggtttcatctca
tttgcagatgcagagtgcgctaagaaagcattggagcagttgaatggctttgagctggcc
ggacggcccatgaaggttggtaacgtgacagaacgcaccgactcctccaccgccagctcc
ttcctggacaacgacgagctggagaggacgggcattgacctgggcaccaccgggcgcctg
cagctcatggcccggctggcagagggtactggtcttcagattcctccagctgcacaacag
gctctacagatgagtggttccatgcactcctcttcaatccacttcggcaacatggcagct
ggtacagacatacaagccaggctgaacccaccccctgaagctgttgccaaccctgccctg
aacctgggtccaagcatgaaccaggccatgaacctcccaactcaaccactggctacacac
tgcctacagctgtccaacatgttcagcccacagtcggaaaatgagcctggttgggacatc
gagattcaagatgacgtcatggaggagtgcaacaaacatggtggaattgtccatatatat
gtcgacaagaactcacctcagggcaacgtgtacgtaaaatgccccactatcccaacagcg
atggctgcagtgaatgccctacatggacggtggtttgcaggtaaaatgatcactgcggca
tacgtacccctcccaacctaccataaccttttccctgattcagtaacggccacccagcta
ctgatgccttcgcggcgataa
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