Oncorhynchus mykiss (rainbow trout): 110492487
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Entry
110492487 CDS
T07259
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omy01001
]
110492487
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110492487
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110492487
Protein kinases [BR:
omy01001
]
Serine/threonine kinases: Other
Other
110492487
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110492487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40
WDR55
LisH
Beta-prop_WDR19_1st
ANAPC4_WD40
WAPL
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
110492487
NCBI-ProteinID:
XP_021422526
Ensembl:
ENSOMYG00000020987
UniProt:
A0A8K9UG90
LinkDB
All DBs
Position
16:61013168..61035347
Genome browser
AA seq
1572 aa
AA seq
DB search
MASASASVDSKAELTALLEHWLEKWEGEQQASTPDLVNILTKISELVERETEEYHKADPD
PFDDRHPGRADPECVLGHLLKILFKDDDFMNALVNSYVMTSRELTLNTAACRLLQNIMPG
LETAVVFQEKEGIVERLFKWAQEAEQPLMIYATGLLAGAMENQDIAANYREENSVLVPLM
LQRLRELQAKDTENRKEFKRPSPRKALGEPLLPLDEETVDGGFEDTPFSSGNNGTERVEK
GPEEDREENPFPPGNNRIEKGPEEDIEESPFPSNESDNSSHKISSCTSSSIKGLMKPVAA
PQSLSHRDFPDGRAEGSSNLKRRAERENGRKVKQKLNFSLPEPERSFSELSNSSWSEMSP
WVIGNNYHLYPLTPEMEQRLILQYLTPLGEYQELLAVFMQMGACELLIHYMDLKQTNDVQ
LTFEALKYLASLLLHKKFAAQFVAHGGVQKLLEIPKPSMAATGVSLCLYYLAYNQDAMER
VCMLPHSILSDVVSYTLWLLECSHASGCCHATMFFSISFSYRAVLELFDRQDGLRRLVNL
ISTLEILNPEDHAAVLSDDQIFSSRQTAKHTCMALRRFFEAHLAIKVEQVKQSLQRTEGG
APIHPQPYYKACSYTHEQVVEMMEFLIEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACD
WRTYYGRSDTVRYALDILSILTVIPKTQLLMAESVAVPDGEGGNAVSTVGMSVVLLVAEG
EVFVNDAEIQKSALQVVINCVCAPDKRMSSIGKFISGTPRRRLPQTTKSSESVLSKMWNV
VQSNNGIKVLLSLLTVKMPITDADQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQ
LMKEPVLQDKRSEHVKFCKFAAELIKRVSGKPLMIGTDVSLAWLQRANVVAQSRISFPEK
ELLLLIRNHLVAKGLHDTATTLTKEADLPMAILPHPSSSALLPVVVPPPPASPAPALPRT
PRLANGVAARLASHGSHPSMPLSVQPRPSTSQLLALPPAAPPLLTPHQSNGSPLIGRIVF
TRERPSPCPVPASCKKPRVLRQKSDYGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQ
HARCKNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTSRNTRRVVYPKYGGVDGGCFDRHL
IFSRFRPMSVFREADEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHS
SAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGT
KEHIAHIYDIQTGQKTLTLNYPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSARAIHKF
DKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQA
DDDDDIMEMQTKTPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSV
NTDTVCRLYEVGRQRLAEEEEDEDDQEDDDQDDDDDDDDDSDDDMDTDPLIAELDNENGE
DEEDEEDGNNELSLSDDEVSRLLEGDGEEEEDDDDDDDDSDDDEEDGDLALDNTDSSDNS
DLEDDIILSLNE
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagcgtggattccaaggcagagctgaccgctctgctggagcat
tggttggagaagtgggagggggagcagcaggctagcacaccagacctggttaacatcctc
accaagatctcagagctggtggagagggagactgaggaatatcacaaagctgatcctgat
ccttttgatgacaggcaccctgggagagctgatccagaatgcgtcttgggtcatctgctt
aagatcctgttcaaagatgatgacttcatgaatgcgttggtgaatagctatgtgatgacc
agcagagagctcacacttaacacggcagcctgtcgcttgctgcagaacatcatgcctggg
ttggagaccgctgtggtctttcaggagaaggagggcatagtggagaggctgtttaaatgg
gcccaggaggctgagcaacccctgatgatctatgctacgggcctgctggctggagccatg
gagaaccaggacatcgctgccaactacagggaggagaactcagtcctggtgcctctaatg
ctgcagcggctacgtgagctgcaggctaaggacactgagaacaggaaggagtttaaacgg
cccagtcccaggaaggccctgggggaacctctccttcctctggatgaggagactgttgac
ggaggcttcgaggacaccccgttctcctctgggaataacggcacagagagggtggagaag
ggaccagaggaggacagagaggagaaccctttccccccagggaataacagaatagagaag
ggaccagaggaggacatagaggagagccccttccccagcaatgagtctgacaactcttcc
cacaagatcagcagctgcaccagctcgtccattaaaggcctgatgaaacctgtggctgcc
ccgcagtctctgtcccaccgggacttcccagatggcagggcggagggcagcagtaacctc
aagaggagggcggagagggagaatggacggaaggtgaaacagaagctgaacttctccctg
ccggagccggagaggagcttcagcgagctgtccaacagcagctggtctgagatgagcccc
tgggtgattgggaacaactatcacctttaccctctgactccggagatggagcagaggctc
atcctacagtacctcacccctctgggggagtaccaggagctgttggctgtcttcatgcag
atgggagcctgtgagctgctcatccattacatggacctgaagcagaccaacgatgtacag
ctcacctttgaggctctcaagtacctggcctccctgctcctgcataagaagtttgcagcc
cagtttgtggcccatggaggagttcagaagcttctggagatccccaagccttccatggcc
gccacgggggtgtctctgtgcctctactacctggcctacaaccaggatgccatggagagg
gtatgtatgctgcctcattccattctatctgacgtggtgagctacactctgtggctgttg
gagtgttcccacgcctcgggctgctgccacgccaccatgttcttctccatttccttctcc
taccgagctgtgctggaactcttcgacaggcaggacggcctccgacgcctcgtcaacctg
ataagtacgctggagatcttaaaccctgaagaccatgcggccgtgctgagtgatgaccag
atcttctccagcaggcagacagccaagcacacctgcatggccctgcgcaggttcttcgag
gcccatctggccatcaaggtggagcaggtcaagcagtccctgcagcggactgaggggggc
gctcccattcaccctcagccctactacaaggcgtgcagctacacccatgagcaggtggtg
gagatgatggagttcctgatcgagtacggcccagtcagattgtactgggagccagctgag
gtcttccacaagctgtcctgtgttcagctgctgctgcagctcatctccattgcttgtgac
tggaggacctactatggcaggagtgacactgtgcgttatgccctggacatactgagcatc
ctgacagtgatcccgaagacccagctgctgatggctgagtctgtggctgtgccagatggg
gaggggggtaatgcagtctccaccgtgggtatgagtgtagtcctgttggtggcggaggga
gaggtgtttgtgaacgacgccgagatccagaagtctgctctgcaggtggtcatcaactgt
gtgtgtgctccggacaaacgcatgtccagcatcggcaagttcatctcgggcactcctcgt
agacgcctgccccagactaccaagagcagcgagagcgtgctcagcaagatgtggaacgtg
gtgcagtctaacaacggcatcaaggtgctcctgtccctgctgacggtgaagatgcccatc
acagatgcggatcaaattcgggccctggcctgtaaggccctggtgggtctgtcccgctcc
agctcagtcagacagattatcagcaagctgcctctcttcagcagcggacacatccagcag
cttatgaaggagcctgtgctccaagacaaacgcagcgaacacgtcaaattctgcaagttt
gcggcagagctcatcaagcgagtgtctggtaaacccctcatgatagggacggatgtgtcc
ctggcctggctgcagagggctaatgtggtggcccagtccaggatctccttccctgagaag
gagctactgctgttgatccggaaccacctggtggccaaaggcctgcatgacacggccacc
acactcaccaaggaggccgacctccccatggccatcctcccccacccatcttcctcagct
ttacttcctgtcgttgttccccctcctcctgcctctcctgcccctgccctcccccggacc
cctcggctggccaatggggttgcagcgcggttggcgagccacggctctcatccgtccatg
ccgttgtcagttcagccccgtccctcgacatcgcaactcctcgcactccccccggccgcc
cctcccctgttgacccctcaccaaagcaacggctctcccctaattggtcggatcgtgttc
acgcgagagcgcccgtcgccatgccctgtgcctgccagctgtaagaagccgcgggtgctg
aggcagaagtcagattacggtgccttcagccagagtccagccatgaagaaacagctggac
agacacctgccctctccccccgccctggacagcatcatcacagagtacctgagggagcag
cacgcgcgctgcaagaaccctgtcaccacctgcccccctttctcccttttcaccccccac
cagtgccccgaacccaagcagaggcgccaggccccaaccaacttcacctcccgaaacaca
cgcagggtcgtctaccccaagtatggaggggtggacgggggctgcttcgacagacatctc
atctttagcaggtttcgtcccatgtctgtgttcagggaggcagatgaggatgagagtggg
ttcatgtgttgtgccttctctgcccgtgagcggttcctgatgctggggacgtgtacgggc
cagctcaaactctacaatgtgttcacaggccaggaggaggcgagctacagctgccacagc
tctgccatcacacacctagagccatcacgggatggctctctgttgttgacgtcggcatca
tggagttatcctctgtctgcactgtggggcatgaagtcagtgttcatcatgaagcattcc
ttcttagatgatcattatgtggagttcagcaaactctcacaagaccgagttattggcaca
aaggaacacatagcccacatctatgacatccagacggggcagaaaaccctgaccctcaac
tacccggacctggccaataactacaagaggaactgtgcgacctttaaccccactgacgac
ctggtgctgaacgatggtgtactgtgggacgtccgctcggctcgtgccatccacaagttt
gacaagttcaacatgaacatcagtggagtgttccaccccaatggcctggaggtcatcgtc
aacactgagatttgggacctgcggacttttcacctcctccatacagtgccagctctggac
cagtgtaggatcgtcttcaacaacaacggcacggtcatctacggagcgatgctccaggca
gatgatgatgatgacattatggagatgcagacgaagactccctttggctcctccttcagg
acgttcaacgccaccgactacaaacccattgccaccattgacgtgaagaggaatatcttt
gacctctgcacagacaccaaggactgctacctggctgtgattgagaaccaggactcagtc
aacacagacacggtgtgcagactgtacgaggtgggacgccagagactggctgaagaggag
gaggatgaagatgatcaggaggatgacgatcaagacgatgatgatgatgatgatgatgac
tctgatgatgacatggacacggaccctctgatcgctgagctggataacgaaaacggggag
gatgaggaagacgaggaagacgggaacaatgaattatctctctctgacgatgaggtgtct
cgcctgctggagggggatggagaggaggaggaggatgatgatgatgatgatgatgactca
gatgacgatgaggaagatggggaccttgccctggataacacagacagctctgacaactct
gaccttgaggatgacatcatcctgtccctgaatgagtga
DBGET
integrated database retrieval system
