Oncorhynchus mykiss (rainbow trout): 110492496
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Entry
110492496 CDS
T07259
Name
(RefSeq) YTH domain-containing family protein 1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110492496
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110492496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Cbm74
TFIIA
Motif
Other DBs
NCBI-GeneID:
110492496
NCBI-ProteinID:
XP_021422541
Ensembl:
ENSOMYG00000035279
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All DBs
Position
16:complement(61779118..61796715)
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AA seq
620 aa
AA seq
DB search
MSATSIDPQRSKGQASKVQNGSLHQKETVHDNDFEPYLTGQSTQVRDWPQNSSYQSMTDP
YLSSYYAPSIGFPYPLSEAPWSTGGDPPIPYLTPYGPLSNGDHHFMPDTVFGQPGGLGSS
IYPHRFNFFPENPTFSAWGTSGSQGQQTQSSAYGGSYSYPPSSLGGTLVPDGQTGFHSDT
LNKAPGMNSLEQGMVGLKIGGDLTGQGSGIKAVGSVIGGPPVVAQGNGGTSIGMPPPKPA
SWAAIASKPAKPQQLKNKVKPGMPSPGGTLPPPPIKHNMDIGTWDNKGPMNKVAQAPMQQ
QQAMSMPHGHPMQPQTPMQQNPMQPPPQSLLQQQMQPMALHHQHPPQPYQHQTQPPPPQT
RWVAPRNRNLGYGQGGAGMDGSSMIGIVSGGNGGPPGSVGMVPGGVENHPVLEKLRAAHS
YNPRVFEWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSLNGKGPVYL
LFSVNGSGHFCGVAEMRSSVDYGTSAGVWAQDKWKGKFDVDWLFVKDVPNSQLRHIRLEN
NDNKPVTNSRDTQEVPLEKAKQVMKIIVGFKHTTSIFDDFSHYEKRQEEEEEVRKTFEPP
APIQNRSRLEQERQNRSKQQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccacaagcattgaccctcagagatcaaagggacaagcatctaaagtgcaaaat
ggttcgctgcatcagaaggagactgtccacgacaatgactttgagccgtacctcactggc
caatcaacccaggtgcgtgactggccgcagaacagcagctaccagtccatgaccgacccc
tacctgtccagctactacgccccctccatcggcttcccctaccccctcagtgaggccccc
tggtccactggtggagaccccccaatcccttacctcaccccctacggacccttgagcaat
ggagaccaccacttcatgcccgacaccgtgtttggccagcctggagggcttggcagcagc
atctacccccaccgctttaactttttccctgagaacccgaccttctccgcctggggcacc
agtggctctcagggccagcagactcagagctcagcctacggtggcagctatagctaccct
cccagctccctgggtggcacactggtgcctgacggccagacaggcttccatagcgacacc
ctcaacaaggcccctggcatgaacagcttggagcagggcatggtgggcctgaagatcggt
ggtgacctcacaggccaggggtcaggaatcaaggctgtgggctctgtgattggcggaccg
ccggtggtggcacaggggaacgggggtacgtccatcggtatgcccccgccgaagcccgcc
tcctgggcggccatcgctagtaagccggccaaaccccagcagctgaagaacaaggtgaaa
ccaggcatgcccagccctgggggaaccctgccccctccgcccatcaaacacaacatggac
attggcacttgggacaacaaggggcctatgaataaagtggcccaagcccccatgcagcag
cagcaggctatgagcatgccccatggccaccccatgcagccccagacccccatgcagcag
aaccccatgcagccccctccccagtccctgctgcagcagcaaatgcagcccatggcctta
caccaccagcaccctcctcaaccctaccaacaccagacccaacccccacctccccagacc
cgctgggtcgccccgcgcaaccgtaaccttggatacggacaaggaggggccggcatggac
ggtagcagtatgattggcatagtcagcgggggtaatggcggtccccctggttctgtcggt
atggtccctggtggagtggagaaccacccagtgttggagaagctgcgtgccgcccacagc
tacaaccccagggtgtttgagtggaacctgaagaacggccgtgtgttcatcatcaagagc
tactctgaggacgacatccaccgttccatcaagtactccatctggtgcagcaccgagcac
ggcaacaagcgcctggacggggccttccgcagcctcaacggcaaaggacccgtttacctg
ctgttcagcgtcaacggcagcggccacttctgcggcgtggccgagatgcgctcgtccgtg
gactacggcaccagtgccggcgtgtgggcacaggacaagtggaagggcaagtttgacgtg
gactggctgtttgttaaggacgtgcccaacagccagctgcgccacatccgccttgagaac
aacgacaacaagccggtgaccaactcccgggacactcaggaggtccctctggagaaggcc
aagcaggtgatgaagatcattgtgggcttcaagcacaccacctccatcttcgacgacttc
tcccactatgagaagaggcaggaggaagaggaggaggtacgcaagacctttgagccacct
gcacccatccagaaccgttctcggctggagcaggagcgccaaaacaggagtaaacagcag
tag
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