Oncorhynchus mykiss (rainbow trout): 110492515 Help Entry 110492515         CDS       T07259                                  Symbol prpf6 Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy03040   Spliceosome Brite KEGG Orthology (KO) [BR:omy00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110492515 (prpf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:omy03041]     110492515 (prpf6) Spliceosome [BR:omy03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     110492515 (prpf6)  Complex C    U5 SnRNP specific factors     110492515 (prpf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRP1_N TPR_14 TPR_19 HAT_PRP39_N Suf HAT_PRP39_C HAT_Syf1_CNRKL1_C TPR_16 HAT_Syf1_CNRKL1_N TPR_2 TPR_17 TPR_8 FAT TPR_15 TPR_1 TPR_9 ARM_TT21_C ARM_TT21_5th HH_EMRA Dehydratase_MU Motif Other DBs NCBI-GeneID:  110492515 NCBI-ProteinID:  XP_036803425 Ensembl:  ENSOMYG00000035584 LinkDB All DBs Position 16:62683677..62707927 Genome browser AA seq 1006 aa AA seqDB search MAGRDGNYNNRNQNDGRGSRGGGQNFGRGSGGRGQNDGRGFGGGGQNSGRGSGGGRGGGR NAEPPPMPMSSPLMGKKKKPFLGMAAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDR HAPPGQRTVGDKMKKNQEDDEEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALD KRMDERRKERRELREKDEIEKYRMERPKIQQQFSDLKRKLSGMSDEEWLSIPEVGDARNK RQRNPRYEKLTPVPDSFFSKHLTTGDKHTTVDPLQGLNLPGGLESPYPGGMTPGLMTPGT GELDMRKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDISDIKKAR LLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPG DTAKAVVAQAVRHLPGSVRIYIRAAELETDVRAKKRVLRKALENVSKSVRLWKTAVELEE PEDARIMLSRAVECCPTSVELWLALARLETYENARRVLNKARENIPTDRHIWITAAKLEE ANGNTQMVEKIVDRAITSLGANGVEINREQWIQDAEECDKAGSVATCQAVIRAVIGIGIE EEDCKHTWMEDAESCVSHGALECARAIYAHALQMFPSKKSVWLRAAYFEKNHGTRESLEA LLQRAVAHCPKAEVLWLMGAKSKWLAEDVPAARSILALAFQANPNSEEIWLAAVKLESEN NEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIEAAHELCTEALKHYEDFPKLWMMR GQIEEQSEHNEKAREAYNQGLKKCPHSMSLWLLLSRLEERVGQLTRARSILEKSRLKNPQ SPDLWLESVRLEFRAGLKNIANTLMAKALQECPNSGILWAEAVFLEARPQRKTKSVDALK KCEHDPHVLLAVAKLFWSERKITKAREWFLRTVKIEPDLGDAWALFYKFEMQHGTEEQQE EVRKRCENAEPRHGELWCAESKHVLYWQKKIGEILTQVASKIKNTF NT seq 3021 nt NT seq  +upstreamnt  +downstreamnt atggctggcagagatggaaactataacaacagaaatcaaaatgatggtagaggctctagg ggcggtggacagaatttcggtcgaggctccggtggccgcgggcagaatgatggtagaggc tttgggggcggcgggcagaattctggtagaggctctggaggtggccggggtggcgggcgt aatgccgagcccccgccaatgcccatgtcctccccgctcatgggcaagaagaaaaagccc ttccttgggatggccgcgccgctaggctatgtgcctggactcggcagaggagccacaggt ttcaccacccgttctgatatcggacccgctcgagatgccaacgacccggtggatgaccgc catgctcccccggggcagaggacggtgggggacaagatgaagaagaaccaggaagacgac gaagaggatctgaatgacaccaactatgatgagtttaacggctatgctggcagtctgttc tccagtggaccctatgagaaagacgacgaggaggcagatgccatctacgcagctctggac aagaggatggacgaacgacgcaaggagaggagggagctgagggagaaggatgagatagag aagtaccgtatggagcgccccaagatccagcagcagttctctgacctcaagaggaagctg tcaggaatgtcagatgaggagtggctgagtatcccggaggttggcgatgccaggaataag cgccagaggaacccgcgctatgagaaactcacccctgtaccagacagcttcttctccaaa cacctgaccacaggagacaagcacaccactgtggacccactgcaggggttgaacctcccc ggtggtctggaaagcccgtaccctggggggatgacccctggcctgatgacccctgggaca ggagagctggacatgaggaaaatcggccaggccaggaacacactgatggacatgaggctc agccaggtgtctgactctgtgagtggacagacggtggtggaccctaaaggttatctcact gacctaaactcaatgatccccacacatggaggagacatcagtgacattaagaaggcccgt ctgctgctgaagtcagtgagggagaccaacccccaccacccccccgcctggattgcttcg gccaggctagaggaggtgacagggaaactacaggtggcccggaacctcatcatgaagggc actgagatgtgtcccaagagtgaggatgtgtggctggaggccgccaggctgcagccaggg gacacagccaaggcagtggtggcccaggcggtgcgtcacctccccgggtctgtccgtatc tacatcagagcagccgagctggagactgacgtcagggccaagaaacgcgtcctcaggaag gcgctggagaatgtgtctaagtcagttcgtctgtggaaaactgctgtagaactggaggag ccagaggatgccaggatcatgctgagcagagctgtggagtgctgtcccactagcgtggag ttgtggctggcactggcacggttggagacctatgagaatgccaggcgtgtcctgaacaag gcccgtgagaacatccctacggaccgacacatctggatcaccgccgccaagctggaggag gccaacgggaatacgcaaatggtggagaagatagttgacagagccatcacatcactcggg gccaatggggtcgagatcaacagagaacagtggatacaggatgcagaggaatgtgataaa gctggcagcgtggcaacgtgccaggcggtgatccgggcggttattggcatcggcatcgag gaggaggactgtaaacacacctggatggaggatgcagagagttgtgtgtcccatggggct ctggagtgtgcccgtgccatctatgcccacgccctgcagatgttccctagcaagaagagt gtgtggctccgcgcagcctacttcgagaagaaccacggcactagggagtctctggaggcg ctgctgcagagggcagtggctcactgtcccaaggctgaggtgctatggctgatgggggcc aagtctaagtggctggctgaggacgtgcctgctgcccgcagcatcctggctctggccttc caggctaaccctaacagtgaggagatctggctggctgctgtgaagttggagtctgagaat aatgaatatgagagagcacgtcgactactggccaaggcccgcagcagtgctcctactgcc agggtgtttatgaagtcagtaaagctggagtgggttttggggaacatcgaagcagcccac gagctgtgtaccgaggctcttaaacactatgaggacttccccaagctctggatgatgagg ggacagatagaggagcagtctgagcacaacgagaaggccagggaggcctacaaccagggg ctgaagaagtgtccccactccatgtccctgtggctgctgctgtctcgtctggaggagagg gttggccagctgaccagggccagatccattctggagaaatcacgcctcaagaacccacag agcccagacctatggttggagtcggtgagattggagttcagggcagggctgaagaacatt gccaacacactgatggctaaagccctacaagagtgccccaactcaggtatcctgtgggct gaggcagtgtttctggaggcacggccccagaggaagactaagagtgttgatgctctgaag aagtgtgaacacgacccacacgtcctgctagccgtggccaagctgttctggagcgagcgt aagatcactaaggccagagagtggttcctgaggacagtgaagattgagccagacctggga gatgcctgggccctcttctacaagtttgagatgcaacacggcactgaggagcagcaggaa gaggtgcgtaagcggtgtgagaacgctgagccgcgtcacggggagctgtggtgtgccgag tccaaacatgtcctctactggcagaagaagataggagagatcctcacacaggtcgcttcc aagataaaaaacaccttctaa

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