Oncorhynchus mykiss (rainbow trout): 110492623
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Entry
110492623 CDS
T07259
Name
(RefSeq) PDZ domain-containing protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110492623
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110492623
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
110492623
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110492623
NCBI-ProteinID:
XP_036803527
Ensembl:
ENSOMYG00000041872
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Position
16:68422113..68431744
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AA seq
656 aa
AA seq
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MGCKHSGQGQWADNGVKGHDLSQLSRQEALHFMGGSYEQPITMQIEGRHRRGRRAHHSQY
PMSDCGIQMERPSWEALRALGVVEGAGPSLGAYAPGPYYDDMPLPPEMYAANGYLSSVAY
NLEDLNRTEYVDDPERCLIGCCNTDNDEPSSFLSQSEYEGHWLDRPMGYLPLHELDSGLG
CTDGSLHQGDPSDPETEEGVEAPMSSPPGHTSRGSSPSSESLLSSEVSDSGFHSVSTREF
RHFQKIIDGRIHNYRSRVVPREKRSKSRWDLESIPETLTCDLQTGRAPDGAHTFMSHQCT
MGGSSIQVREAMSPQQTRHGTRSAASSCHTEPCQRRALMLNQHSSEDLPSRSHTVHDLSD
RRRASHPGLPSGNNAIEIYRHIDRQLPSNPSHLAVPTENSGTGQYNRGFNTDIIEKRKHQ
SSHVEGPWQGLYVEDHRGSMASEDSNSQKQCPSKSPSRKRPGKQLADWRQFATLGHPQIG
GDWPQADSPCGPLYSTLDGLYAHSRKGLSGNPRAVRNQLLKARASRLADERSEVTTDEEA
RGDVWAGRYWSRTERRRHLALAREQRQRKLSRGGPEGAAEDGAGGTGGAGGQGGAEGPGG
GCSTVLELSHRKQSRLRNHELLDDWTTVEELLTHGTRVGEGDNILCHSPLLSVTTV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtaaacactctggacagggccagtgggctgacaatggggtcaaagggcatgac
ctgtcccagctcagccgccaagaggcgttgcatttcatggggggcagctatgagcagcca
atcacgatgcagattgagggacgacacaggagagggagaagagctcatcactcccagtac
ccaatgtcagactgcggtatccagatggagaggccatcctgggaggctctgagggcccta
ggggtggtggagggggctggacccagccttggggcctacgctcctggaccttactacgat
gacatgcccctcccaccagaaatgtacgcagccaatggatacctctccagtgttgcctac
aatctggaggaccttaacaggacagagtatgttgacgatccagagcgctgtctgattggt
tgctgtaacactgataatgatgagcctagcagcttcctgagccagagcgagtatgagggc
cactggctggacaggcctatgggctacctgcccctgcacgagcttgacagcggcctcggc
tgcaccgacggcagcctccaccagggggacccgtctgacccagagacagaggagggggta
gaggcccctatgtcctccccaccaggacacaccagccggggcagctctccctcctctgag
tccctcctctcctcagaggtcagtgactctggattccacagcgtcagcacacgggagttc
cgccacttccagaagattatagatgggaggatccacaactaccggagccgcgtggtccca
cgggagaagagatcaaagtctcgctgggacctggagtccatccctgagaccctgacctgt
gacctccagacaggcagggctccagatggagctcacactttcatgagccaccagtgcacc
atgggtggtagctccattcaggtccgcgaagccatgagcccccagcagaccaggcatggc
accaggtctgctgcctccagctgccatactgaaccctgccagaggagagcgctgatgctg
aaccagcactcctccgaggacctcccaagccgcagccacactgtgcatgacttatcagac
aggagacgagccagtcaccctggcctgccctctgggaacaatgccatagagatatataga
cacatagacagacaactgcccagcaacccaagccacctagccgtacccactgagaactct
ggcacaggacaatacaacagggggttcaacacagacatcattgagaagaggaagcatcag
agcagccatgtggaaggcccctggcaaggactatatgtggaggaccacagaggcagtatg
gccagtgaggactctaacagtcagaaacagtgtccttccaagagtccctcaaggaaacgg
cctgggaagcagctagcagactggcgtcagtttgcaacactgggacatcctcaaattggt
ggggactggccccaagcagacagcccctgcggccccctctacagcacgctggacgggctc
tatgcccactccaggaagggtctctctgggaacccccgggcagtgaggaaccagctcctg
aaggccagggcctcccggctggctgacgagcgcagtgaggtcaccacggacgaggaggcc
cgtggggatgtctgggcaggccgctactggagtaggacggagcgccggcgccacctggcg
ttggcccgtgagcaaaggcagaggaagctgagccgtggtgggcctgaaggagcagcagag
gacggggctggaggaacagggggtgcaggggggcaagggggtgcagagggccctggagga
ggctgtagcacagtgctggagctcagccacaggaagcagagccgtctgaggaaccatgaa
ctgctggatgactggaccacagtagaggagctgctgacccacggcacccgcgtgggggag
ggggacaacatcctctgtcacagcccactgctgtcggtcactacagtataa
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