Oncorhynchus mykiss (rainbow trout): 110492634
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Entry
110492634 CDS
T07259
Name
(RefSeq) partitioning defective 6 homolog beta
KO
K06093
partitioning defective protein 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
omy04517
IgSF CAM signaling
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110492634
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110492634
09144 Cellular community - eukaryotes
04530 Tight junction
110492634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110492634
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
110492634
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
110492634
NCBI-ProteinID:
XP_021422734
Ensembl:
ENSOMYG00000042586
UniProt:
A0A8C7UGR5
LinkDB
All DBs
Position
16:68973714..69006032
Genome browser
AA seq
387 aa
AA seq
DB search
MNKNHRVPSNRSLGAVEVKSKFGAEFRRFSLDRSKPGRFDEFYRLLQHMHRIPNVDLLVG
YADVHGDLLPINNDDNYRKAISVADPVLRLFLQRKEEADYSAFGLDSLTRPKKTVLAAML
LRPDANRKKPLVIISLPRDFRPVSSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSV
RVTPQGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVQGKSLDQVTDMMIANS
HNLIVTVKPANQRNNIVRSGGGGAASGSSGHSSDSGTSFYGYSSPGIAVATTPADIIQNF
HPEELESDEDDEDLVIEVDGEAMPIPRTSSASCTIPFIPRYMPHLDLRTTNGALASHNRS
GSLGTLSTADRGLEGRSLEEEGTVITL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaccaccgagtgccgagcaaccggtctctgggcgccgtggaggtgaagagc
aagtttggggctgaattccgccggttctccctggaccggtccaagccgggccggtttgat
gagttctataggctcctacagcacatgcaccggatcccaaacgtggacctgctggtgggc
tatgctgacgtccacggtgacctgctgccaatcaacaacgatgacaactaccgcaaagcc
atctccgtggctgaccccgtgcttcgcctcttcctgcagaggaaagaggaagccgactac
tctgcgtttggtctggactctctgacccgtcccaagaagacggtcctagcggccatgttg
ctacggcctgatgccaaccggaagaagccccttgtgatcatcagcctgcccagggacttc
aggcccgtctcctccatcatcgacgtggacatcctccctgagacacaccgccgggttcgc
ctctacaagcacggccaggagaaaccgctgggcttctacatccgagacggctccagtgtc
cgggtcacgccccagggcctggagaaggttcctgggatcttcatctcccgcatggtgcct
gggggcctggctgagagcactggcctgctggccgtcaacgacgaggttctggaggtcaac
ggcatcgaggtgcaaggcaagtctctggaccaggtgacagacatgatgatcgccaacagc
cacaatctcatcgtgacggtgaagccggccaaccagcgcaacaacatcgtacggagtggc
gggggcggggcagcgtccgggagctcgggacactcgtccgacagtggcaccagtttctac
ggctactcctccccgggcattgccgtggcgacgactccggcagacatcatccagaacttc
catccagaggagctggagagtgatgaggatgatgaggaccttgtgatagaggtggacgga
gaggccatgcccatcccacggacctcctcggccagctgtaccatacccttcattcctcgc
tacatgccccacctggacctccgcaccaccaacggagccctggcctcccacaaccgctcc
ggctcactgggcacgctcagcactgccgacaggggcctggagggaaggagcttagaggag
gaaggcaccgtcattacactgtaa
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