Oncorhynchus mykiss (rainbow trout): 110492743
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Entry
110492743 CDS
T07259
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110492743
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110492743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
Motif
Other DBs
NCBI-GeneID:
110492743
NCBI-ProteinID:
XP_021422878
Ensembl:
ENSOMYG00000008330
UniProt:
A0A8C7P3K0
LinkDB
All DBs
Position
16:46294406..46316503
Genome browser
AA seq
1357 aa
AA seq
DB search
MNSRDGDSPVPKQAHRGQRQPKAQNVFSMKKNRTPSSVQTKDAPGSSRSTGTIRRIVGKG
NEIKSEKGTCTGNGVPCVTECQNNQITLRKLSDARNASGDLSKDSDCVLGKLSSSDSSSE
MSDCTEGFRTASEENQLSADTLSPSSETGSSVRDGDANSDRLSGNALNSVSDMSTGGNPF
TRIGISHDNSIMHSGRGGNHPWTSPGCGGSLLPSLNVSVASLSYSELTGELVDETHEDLV
RENDDLRSENEYLKDEMEELRCEMLEMRDLFLEDEVYQLQELRLQLEQANKMCRILQYRL
RKAERRSLRVAQTGQVDGELVRSLEHDVKVAKSVSLRLHNELESVQKKNSRLEWENEALR
EMQQELEVAKQVLQAEMEKARESSLKRKNVRSPTNKTEKKLSSQDDSADLKCQLHFAKEE
SSLMCKKLAKMVSESEGMREELAKFRSAYGDVDAAAHSSEESPHTREAEVKVHLRLVEEE
ATLLSRRIVELEVENRGLRAEMSDMRDSGRVGGEEEEESLQEGVGEHGDLPPAHLRDAEE
GERGLTMEYIQFEEVARERQRRCVIKCSQEEVIEIQHRDQSQTERLGPLKQIPREGPVGG
EREPLDNQQSDTCRGSVANALNVKHHEALLALRDHACLVTSAIQLLASPTQNGHRSPALS
PHLPRAKSYPQGKAQPLALDPLMQGHLYEALELLKAMLLALIVRVESLVTPGGQLRVDGD
PITIPSLADQETKNNTEVLAKHENGEGLCTVVLKEKVKWATQSDHLDSCMDPMMQLTLKM
LWVLHQHCLRKGSGLGDKESRDPTTMSMLHGLLQYLGTELQDSEDSIAGQDSKATWASDW
NGLISKMECNTGKTRAQGYSVQPSHPMDTQSEMTETGNKIRPESSTFGSNKKNWCYLSHE
AAQLDRGDPFKTWDHPIMPPSFRNLHLDQLSLDRSHTAPEKTVLRIYYSPLSARRVHLVH
LRHSSNTDRNGTTSVISTRLSTSQSSLTPLCLRLSANLSDDMKEMTASLRQAVHSSSPER
RKGRVIMSGGWTVDVATSGTQTQMHPQMVSVGIQTDGSYSIGAVRASPSRLSARAQQIST
SLERLPGRTERPKSGSTSPKLYRRHSASASSISPSCSFPSSTTGFTTTMSNTTTPNSSTA
SSATPGSERILWGLSHRGPAGSTWARPTNPRAGPGLVHHSTVNSELSSGGNTKPTSKPAG
ANRYGLVTEFLRKMSGRADKPAPASASGGGQKGKCSPTHKTLERGPSRPPAAPVHRNDNV
TRIVNQRFMKQREEACRGHICPSQNQAVRKEPSLESNVTLEDRNYECSSSKSLSFCFARS
SRSSTQRNALTPTKLQRHRYSSAVNGGGSGEPNSNCE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagggatggtgacagtcccgtgccaaaacaggcgcaccggggacaaagacag
cccaaggcgcaaaacgttttcagcatgaagaagaatcgaaccccatcgagtgtgcaaacc
aaagatgccccaggctcatccaggtcaaccgggactatacggcgcatcgtgggcaaaggg
aatgaaattaaatcggagaaagggacgtgtacaggaaatggcgtgccatgcgttaccgag
tgccaaaataatcaaatcacacttaggaaactatctgatgccagaaatgcttcgggggat
ttgagcaaggactcagattgcgtcttggggaagctatcatcatcggacagcagttctgaa
atgtctgactgcacggagggatttcggactgcatcagaggaaaaccaactttctgcggac
actctgtctccaagcagcgagactggatcaagtgttcgagacggagatgcaaatagtgac
aggttgagtgggaatgctctaaacagtgtttccgatatgagtactggaggcaacccattc
acacggataggcatatcacatgacaattccatcatgcattctggtaggggtggaaaccat
ccctggacatctcctggatgtggagggtctcttcttccttcgctgaatgtcagcgtagca
tccctgtcttattcagaactgaccggggagctcgtggacgagacgcacgaggatcttgtc
agagaaaacgacgacttgagatcagaaaatgagtatttgaaagatgagatggaggagctg
cgctgtgagatgctggagatgcgggatctgttcctggaggatgaggtgtatcagctgcag
gagctgcggctgcagctggagcaggccaataagatgtgtcgcatcctgcagtaccgcctc
cgaaaggccgagcgacgcagcctcagggtggcccagacaggccaagtggacggggaacta
gtccgctccctggaacacgacgtcaaggtagcaaagagtgtatccctccgcctacacaat
gagttggagtcagtgcagaagaagaactcccggctagagtgggagaatgaggcactgcgg
gagatgcagcaggagctggaggtggcgaagcaagttctgcaggccgagatggagaaagcc
agagagagttctttgaagagaaaaaatgtcagatcaccaaccaacaagactgagaagaag
ctgtcgtctcaggatgacagtgctgatctgaagtgccagctccacttcgccaaggaggaa
tcatctctcatgtgcaagaagctggccaagatggtgtcggagagtgagggcatgcgtgag
gaactggcaaagttccgctcagcctacggagacgtagacgctgctgcccactcctctgag
gagtccccgcacaccagggaggcagaggtcaaggttcacctgcggctggtggaggaggaa
gcaacgctcttgagccgccgtatcgtagagctggaggtggagaaccgtggcctccgggcg
gagatgagcgacatgagggatagtggaagagtaggaggagaggaggaagaggagtcattg
caggaaggtgtcggggaacatggggatttaccaccagcccatcttagggatgcagaggaa
ggtgaaaggggtttgacaatggagtacatccagtttgaggaggtggcgagggagagacag
aggagatgcgtgattaagtgttctcaggaggaggtgattgaaatacagcatagagaccaa
tcccagacagagaggctgggtcccctcaaacagatccctcgagaggggcctgtaggtggg
gaacgggagcccctggacaaccagcagagtgatacatgcagaggcagtgttgccaatgcc
ttgaatgtgaaacatcatgaggccctccttgccttgcgagatcatgcctgccttgtgact
tcagctatccaacttcttgcctcaccaacccaaaatggccacaggtcccctgccttatct
ccccacctcccccgggcaaagtcttaccctcagggtaaagcccagcctctggctctggac
ccactcatgcaaggccacctgtatgaggctctggagcttctgaaggccatgctgttggcc
ttaattgtgagggtggagagcctggtgacaccaggaggacagttgagggttgacggggat
cccatcaccatcccctccctggctgatcaggaaacaaagaacaacacagaggtcttagcc
aagcatgaaaatggcgaaggcctgtgcacagtagtgctaaaggagaaagtgaaatgggca
acacagtcagaccacctggacagctgcatggaccccatgatgcagctgaccttaaagatg
ctctgggtcctccatcagcactgtctgaggaagggatctggcctgggggacaaggagagc
agagatcccacgaccatgtctatgctacacgggctgctgcagtatttgggtacagagctg
caggactcagaggacagtatagcaggacaggattccaaggccacatgggcatcagactgg
aacggcttaatctccaagatggagtgcaacactggtaagactagggcacagggttattca
gtccagccaagtcaccctatggacacacagagtgagatgactgagacaggaaataagatc
agaccagaaagttctacatttgggtccaataagaagaactggtgctatctcagccatgag
gcagctcagttggacagaggggacccgtttaagacctgggaccatcccatcatgcccccg
agcttccgcaatctgcacttggaccagttgtccctggacaggagccacactgccccagag
aagaccgtcctccgcatttactacagtcccctgtctgcaaggagagtccatctggttcat
ctgaggcacagctccaacactgatagaaatggtactaccagtgtaatctccaccagactt
agtacgtcccaaagctctctcactcccctatgtctgaggctctccgctaacttaagcgac
gacatgaaggagatgacagctagcttacgacaggcagttcactccagttcgccagagagg
aggaaggggagggtgatcatgagtggggggtggacggtggatgtggccacctcagggact
cagacccagatgcacccacagatggtgagtgtgggtatacagacggatgggtcctacagt
ataggtgcagtgagagcctccccttcacggctttctgcccgtgctcaacagatttctact
tccctggagaggctcccaggtaggacagaaaggcccaagtctggctccacctccccaaaa
ctgtatcgcagacactctgcctctgcatcttccatctccccctcctgctctttcccttct
tccacaactggtttcaccaccaccatgtccaacaccacaacccccaactcctccaccgcc
tcctctgccaccccaggcagcgagcgtattttatggggcttgtcccatcgtggtccagct
gggtcgacatgggcccgccccaccaatcccagagccggtccagggcttgtccaccatagt
acagtaaacagtgagttgagcagtggtggaaacactaaacccaccagcaaacctgccggg
gccaaccggtacggcctagtcactgagttcctacgcaaaatgagtggtcgggcagacaag
ccagccccagcatcagcatcaggcgggggtcagaaggggaaatgcagtccaactcataaa
accctagagcgagggccctctcgtccccctgctgcaccagtacacaggaacgacaatgtc
accaggattgtgaaccagaggttcatgaagcagagagaggaagcgtgccggggccatata
tgccccagtcagaaccaggctgtcagaaaagaaccgagcctggagagtaacgtgacactg
gaggataggaactatgaatgtagcagttccaagtccttgtccttctgcttcgcccgatca
tctcgctcctccacccaacgaaacgccttgaccccgaccaagctccagcgacatagatac
tcctctgctgtcaacggtggtgggtcaggagagcccaactccaactgtgaatga
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