Oncorhynchus mykiss (rainbow trout): 110492800
Help
Entry
110492800 CDS
T07259
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110492800 (npas4l)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110492800 (npas4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
PAS
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
110492800
NCBI-ProteinID:
XP_036801780
LinkDB
All DBs
Position
16:complement(159650..172051)
Genome browser
AA seq
970 aa
AA seq
DB search
MSDLIISVLLGVETTSGRMTVCCESCESPWSSERCSSHLFSGETESRLGLCKRFRSTKGA
SKARRDQINSEIRNMRTLLPIPQEDQDRLSYLHSMAVITAYIRKSFLYKGLSADQSRLSS
SSSYPLYETFLPAVQGFILILSSRGRLVYVSENVSDYLGLSMVDVLQGDTFYDLVESQDV
ETVRSNLETDNTTSTAERSFVCRMHTSKAFRLEYGNCCSIMVRGRYQTIPQSPQSTPTSS
PDRGRSGLPVERVFLALCTPTVNHLGNRIFSSCSSSFTSLHRPDMSFSHLDESVVFYLGY
SSEELIGRSWYSLLHPEDLSLSAYSHKSLMQADEGRQVEMVLRLQHSDLSWSWIYTRAAK
HSGNQELSCCNYIISETEAMYLRKNIHSDAFRASPPQPYCPSPTPQLTQSCCPTRDLKRQ
REFSQCSSISETENRSKTSRRQRAESNAVFYVTSCSSSSQASPVAAFSTPPYSPTSSHYN
SSLSPAQQDDTSSDSLLDVYGYTENLTSYYHCPEGGTEVGTGPSCLLSPSRSFQPGSEQS
FHQGIFSQTDAFSPQSCPSSPQHDCPACPADARLVPDCLSVSDLLESSADCPITIHTEDY
SLSVQPQGGATSPYSLSVQPQGDATSPYSLSVQPQGGATSPYSLSVQPQGDATSPYSLSV
QPQGDATSPYSLSVQPQGDATSPYSLSVQPQGDATSPYSLSVQPLGGATSPYSLSVQPQG
DATSPYSLSVQPQGDATSPYNLSVQPQGGATRTYQSHHIPQTVAPPIGGLLTPNPSPTSD
LSFLYSDRDKVEISILAQQISSLASSFDLFNTLSPIQTPRQPSSEPLPWAQLPGHSPVPL
RIKPELVLDEGVFDSLLKDLSMVQGPGSLSHCYQPQDPSTLALSSLVDPLSMEQSSRSLS
LPLELPSSLSLSLPLQHPSSPSFSLPLDPFHPNLDPFSLRTSCHNQTSELHQLNLPHSLH
QDGLVEESMY
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttgatcatatctgtacttttaggtgttgaaacaacgagtggcagaatgacg
gtttgttgtgagtcgtgtgaaagtccatggagcagtgagcgctgctcctctcatctgttc
agcggggagacagaaagccgcctgggactctgcaagagattcaggtctactaagggagcg
tctaaagccaggagggaccagatcaactctgagatcaggaacatgagaactctgctcccc
atccctcaggaggaccaggacagactgtcatacctccacagcatggcggttatcacagca
tacatcaggaagagctttctgtataagggattatcagctgatcagagtcgtctctcctct
tcctcctcctatcctctgtacgagaccttcctcccagccgtgcaaggtttcattctgatc
ctctcctcccggggcaggctggtctacgtctctgagaacgtctctgattacctggggctc
tccatggttgatgttcttcagggagacacattctatgacctggtggagagtcaggacgtg
gagacagttagatctaacctggagacagacaacacaacgtcaactgcagagaggagtttt
gtgtgtcggatgcacacctccaaggccttcagactagagtacggtaactgctgttctata
atggtccgaggacgctaccagaccatcccacaatccccccagtccacgcccacatcctcc
ccagaccgtggccgatctggcctccctgtggagagggtgttcttggctctctgcacaccc
acagtgaaccacctgggcaacagaatcttctcctcctgctcctcctccttcaccagcctc
catagaccagacatgagcttcagtcacctggacgaaagtgttgtgttttacttgggctac
tcatcggaggagctgattggtcgatcgtggtacagcctcctccaccctgaagacctctcc
ttgagtgcctactcacataagagtctgatgcaggcagacgagggtaggcaggtggagatg
gttctgaggctccaacacagcgacctctcatggtcctggatctacactagagccgctaag
cattctgggaaccaggaattgagctgctgtaactacattatcagtgaaacagaagccatg
tatctgaggaaaaacatccacagcgatgctttcagagcctctcctcctcagccctactgc
ccctctcccaccccccagctgacccagagctgttgccccaccagggacctaaagagacag
agagaattcagccagtgcagtagtatatctgagactgagaacaggtctaagaccagtagg
agacagagagcagagtctaatgctgtgttctacgtgacatcatgtagctcctcctcccag
gcctcacctgtcgccgccttctccacccctccctacagccccacctcctcccactacaac
tcctccctctctccagcacagcaggacgacaccagctctgactctctgttggatgtgtat
ggctacacagagaacttaacctcctactaccattgccctgagggagggactgaggtaggg
actgggccttcctgcctcctctccccctctaggtccttccagcccggctcggagcagtcc
ttccaccagggtatcttcagccagactgacgcattctctcctcagtcctgcccttcttct
ccccagcatgattgcccagcatgccctgctgatgcccggctggtccctgactgtctatct
gtatcagacctgttagagagttcagcagactgccccatcaccatccatactgaagactac
agcctctcggttcagccacaaggtggtgccaccagtccatacagcctctcggttcagcca
caaggtgatgccaccagtccatacagcctctcggttcagccacaaggtggtgccaccagt
ccatacagcctctctgttcagccacaaggtgatgccaccagtccatacagcctctcggtt
cagccacaaggtgatgccaccagtccatacagcctctcggttcagccacaaggtgatgcc
accagtccatacagcctctcggttcagccacaaggtgatgccaccagtccatacagcctc
tcggttcagcctctaggtggtgccaccagtccatacagcctctcggttcagccacaaggt
gatgccaccagtccatacagcctctcggttcagccacaaggtgatgccaccagtccatac
aacctctcggttcagccacaaggtggtgccaccaggacataccagagccaccatatacct
caaactgtcgctcctcctattggaggcctgctgacccctaacccctccccgacctccgac
ctctccttcctctacagtgacagagacaaggtagagatcagtatcctagcccagcagatc
tcctctctggcctccagcttcgacctgttcaacaccctgagccccatccagaccccacgt
cagcccagctcagaaccccttccctgggcacagctcccaggccactcccctgtccccctc
cgcatcaagccagagctggtcctggatgagggagtgtttgatagtctcctgaaggatctg
agcatggttcagggacctgggagtctgtctcactgctaccaacctcaggacccttccacc
ctggctctgtcttctctagtggaccctctatccatggagcagtcatcccgctctctctcc
ctccccctggaactcccctcatccctctctctctccctccccctgcaacacccctcgtcc
ccctctttctccctccccctggacccatttcaccctaacctggatcccttctctctgagg
acaagctgtcataatcagacctctgagttgcatcaactcaacctgccccacagtctgcat
caagatgggcttgttgaagaatccatgtactga
DBGET
integrated database retrieval system
