KEGG   Oncorhynchus mykiss (rainbow trout): 110492801
Entry
110492801         CDS       T07259                                 
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141  Protein processing in endoplasmic reticulum
omy04210  Apoptosis
omy04217  Necroptosis
omy04218  Cellular senescence
omy04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110492801
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    110492801
   04217 Necroptosis
    110492801
   04218 Cellular senescence
    110492801
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110492801
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:omy01002]
    110492801
Enzymes [BR:omy01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     110492801
Peptidases and inhibitors [BR:omy01002]
 Cysteine peptidases
  Family C2: calpain family
   110492801
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 110492801
NCBI-ProteinID: XP_036801894
LinkDB
Position
16:5196694..5243823
AA seq 702 aa
MSEGISASIATSRLRAEGMGSNDHAVPFLEQDYEALRQECLETGCLFQDPSFLAEPPSLG
FKELAPFSAKTRDVEWMRPTELTDDPQFILGGATRTDICQGALGDCWLLAAIASLTLNER
LLHRVVPHGQSFQEDYAGIFHFQFWQFGEWVDVVIDDRLPTKNGEIMFVHSAEGNEFWSA
LLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRDLYRIIGKALDRGSLLG
CSIDITSAFDMESVTFKKLVKGHAYSVTGLKKVDYQGQGERLIRVRNPWGQVEWTGAWSD
NSPEWDELDPSEREDLHLKMEDGEFWMSFQEFLRQFSRLEICNLTADALSEDGLSHWNTI
MFHGMWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEVACSFLVALMQKDRRRY
RKQGQDMHTIGFAIYEIPEEYRGCQNVHLKKDFFLTHSSCARSETFVNLREVSNRLRLPP
GEYLIVPSTFESGQEADFVLRVFTEKQSETEELDDEISADLEDEDDISEDDVEDSFKSMF
SQLAGEDMEISVRELRTILNRVVTRHEDLKTDGFSMESCRTMVSLMDKDGTARLGLVEFQ
MLWNKIRKWLVIYREYDMDKSGSMSSYEMRLAVESAGFKLNNRLNQVLVARYAENEAIDF
DNFICCLVKLEAMFRSFQQLDKEGEGVAEMNIAEWLYMTMCG
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgtcagagggaatctctgctagcatagccaccagcagactgcgagctgagggaatgggc
tccaacgaccacgccgtacccttccttgagcaggactatgaggctttgaggcaggagtgt
ctggagacggggtgtctgttccaggacccctccttcctagccgagcctccctctctgggc
ttcaaggaactggcccccttctccgccaagaccagggacgtggaatggatgagacccacg
gagctgacagatgaccctcagttcatcctgggaggagctaccagaacagacatctgccag
ggagctctaggtgattgctggctcctagcagccatagcctctctaaccctcaatgagagg
ctgctccaccgagtggtccctcatggtcagtccttccaagaagactatgctgggatcttc
cactttcagttctggcagtttggtgagtgggtggacgtggtgattgacgaccggctgcca
acgaagaatggagagatcatgttcgttcactcagccgagggaaatgagttctggagcgcc
ctgctggagaaggcttacgccaagttgaatggttcctacgaggctctgtctggaggcagc
accacagaaggctttgaggacttcaccggcggtgtgtctgagatgtacgagctccgtaag
gctccacgggacctgtacaggatcatcggcaaagccctggacagaggctccttgctgggc
tgctccatcgacatcaccagtgcctttgacatggaatctgtgacgttcaagaaactggtg
aaaggtcatgcttactcagtcaccggcctgaagaaggtggactaccagggtcagggggag
aggctgatcagggtgaggaacccctggggacaggtggagtggactggcgcctggagtgac
aattctcctgagtgggatgagttggacccatctgagagagaggacctgcatctaaagatg
gaggacggagagttctggatgtcgttccaggagttcctgaggcagttttcccgcctggag
atctgcaacctgacagcggacgctctcagtgaggacggcctcagccactggaacaccatc
atgttccacggcatgtggagacgggggagtaccgccgggggctgccgtaaccaccccaac
acgttctggatcaacccccagtataagatcactctgctagaggaggacgacgaccccgag
gatgaagaggtggcttgtagcttcctggtggctctgatgcagaaggacaggaggaggtac
cggaaacagggtcaggacatgcacaccatcgggttcgccatctacgagattccagaagag
tacaggggctgtcagaacgtgcacttaaagaaggacttcttcctgacccattcatcctgc
gctcgctcggagaccttcgtcaacctgagagaggtcagcaaccgtctccgtctgcctcca
ggagaatacctcatcgtcccctccaccttcgagtctggccaggaggccgacttcgtcctg
cgagtcttcactgagaaacagtctgagacagaagagttagatgatgaaatctcagcagat
ctggaagatgaggatgacatcagtgaagatgacgtcgaagactcattcaaatctatgttt
tctcagctggcaggagaggacatggagatttctgtccgcgagcttaggaccatcctgaac
agagtagtgactagacacgaagacctgaagacagacggcttcagtatggagtcctgtagg
accatggtcagcctcatggataaggatggcaccgcccgtctcggcctggtagagttccag
atgctctggaataagatcaggaagtggctggtcatctatagagaatatgacatggacaag
tcgggatccatgagctcctatgagatgcgacttgctgtggagtcggcaggttttaaactg
aacaacaggctgaatcaggtcctggtggctcgctatgctgagaacgaggccatagacttt
gacaacttcatctgctgtctggtgaaactggaagccatgtttagatctttccagcagcta
gacaaagagggagaaggagtggctgagatgaacatcgctgagtggctgtatatgaccatg
tgtggttga

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