Oncorhynchus mykiss (rainbow trout): 110492826
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Entry
110492826 CDS
T07259
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110492826
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110492826
04082 Neuroactive ligand signaling
110492826
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110492826
Ion channels [BR:
omy04040
]
Ligand-gated channels
Glutamate (ionotropic)
110492826
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
110492826
NCBI-ProteinID:
XP_036801765
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All DBs
Position
16:complement(11536438..11636884)
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AA seq
1532 aa
AA seq
DB search
MVEGECGRGRWKGAVEGDGGRGRWKGTVERDGGRGRWKGTVERDGGSGRWKGTVEGDGGK
GRCKGTVEGDGGRGRWKGTVEGDGGKGRWKGTVEGDGGKGRWKGTVERDGGRGRWKGTVE
GDGGKGRWKGTVEGDGGKGRWKGTVEGDGGRGRWKGTVEGDEVNPVTVLVNDTNPRALLT
RLCQTMATEKLHGVVFEDDVGSGAGPQVAEVAQILDFLSTQTALPIIGISGGSAVVIPHK
TAVAHTNAHPVGREITVATLDLSAEGSTFLQMGASLEQQIVCMFKLMEEYDWGDFVVITS
MLPGYETFVDYVRSYTDTSYFLWRLQDILSLEMSIGTSDVRAKRMLQQIDSQVLVAYCSH
EEAQYLFQVAGEVGLLGPGYIWILPSLALGNTESPSPSSFPIGVIGVITDQWRKSLRQRV
REGVAIVAKGAESFKRHQGFVPEGHSDCNTPVTHINNNTLFRHMLNVTWERKDLSFNSDG
YLTNPSMVIIALNRDRQWDKVGTLERGILQVRYPVWPRYGSFLEPVSDDRHLTVATLEER
PFVIVENVDPDTGTCVRNTVPCRRQSNRTESIVGHSEPYTKLCCKGFCIDILKKLSRTIK
FSYDLYLVTNGKHGKMISGIWNGMIGEVFYRKADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAK
AAGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHAHMVKYNQKG
VEDALNSLKTAKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWK
RPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFSWEHLLYWKLHKELDKSPRMDFLLAISRGIYSCFNGVEEPDLPNLANPDLTANYAQA
NMLKMLRTAKDLVNSAQVETSLDHASKTIEHWGRHGGSLPVHIPQQGTTETVPGGFAYVT
ENTHLPPERPLSPQYCTLGVATSVNQQRGLARPTPLRYTLPARTSSLYDRPLPVSSLICP
HLDLAGGDRLSSYPHPSTGRLYVDPQHLSHPRSPFIPYSELQLPDIYLSSHPPSAVSHPP
HTEPSKRKRRSKSLLSGETGRGGGQRRRRREEKTVCLAELRANHLQENHVSPHMPDSLYP
GAVLCPGEEGCGGSWPLPLEELVLAGRRRCHRRPSFLRATWGSEQIRQPDDTPPTSLDSQ
SHSALPDLFPRVMVDQETPTKLYNPTPFRNNLCYPAASPRQHAYLHIRQDQRKGNSRKKL
RHSHSTHLPTYREAVLGGQGGGGGVGLGVVRRTTSLLSRQYNDYLTSYPGLPLYHSPLNL
QTHSPASSNHPSPGTYRIPNPVCQLLACGGGCRSQRGLLYQDSLYGAYGAYGGAQDPDIE
PQRGEGLVGLRSEDRPCVTRPWGKVSSLESEV
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaggggaatgtggaaggggacggtggaagggggcggtggaaggggacggtgga
aggggacggtggaaggggacggtggaaagggacggtggaaggggacggtggaaggggacg
gtggaaagggacggtggaagtggacggtggaaggggacggtggaaggggacggtggaaag
ggacggtgcaaagggacggtggaaggggacggtggaaggggacggtggaaggggacggtg
gaaggggacggtggaaagggacggtggaaggggacggtggaaggggacggtggaaaggga
cggtggaaagggacggtggaaagggacggtggaaggggacggtggaaggggacggtggaa
ggggacggtggaaagggacggtggaaggggacggtggaaggggacggtggaaagggacgg
tggaaagggacggtggaaggggacggtggaaggggacggtggaaagggacggtggaaggg
gacgaggtgaacccggtcactgttctggttaatgacaccaaccctcgcgccctgctgacg
cgtctctgtcaaaccatggccacagagaaactgcatggagtcgtgttcgaggacgatgtg
ggatcaggagctggacctcaggtggcagaagtggctcagatcctggacttcctgtcgact
cagacagctctacccatcattggcatcagcggaggatctgccgttgtcatacctcacaag
acggccgtagcccacaccaacgcccacccagtcggcagagaaataaccgtggcaaccttg
gacctctcagctgagggttccacgttcctccagatgggtgcatcactggaacagcagatt
gtctgcatgttcaagttgatggaggagtatgactggggagactttgtagtcatcacaagc
atgttgccgggatacgagacatttgtggactacgtccgctcctacacggacacgtcctac
ttcctgtggaggctgcaggatatcctgtctctggagatgtctatcgggaccagcgatgtc
cgcgccaaacgcatgttacagcagattgactcccaggtactcgtagcctactgctcccat
gaagaggcccagtacctgttccaggtagcaggggaggtgggtctattggggcctggctac
atctggatcctcccctccctcgcgttgggcaacacagagagcccttcacctagcagcttc
cccataggagtgattggcgtcatcaccgaccaatggaggaagagcctgaggcagcgggtc
agagagggagtggccatagtggccaaaggggcggagagtttcaagaggcatcaggggttc
gttcccgagggacacagcgactgcaacacaccagttacacacattaacaacaacacactg
ttcagacacatgctgaacgtgacatgggagcgtaaggacctgtcgtttaatagtgatggt
tacctgacaaacccttccatggtcatcatcgctttgaacagagacagacagtgggacaag
gtggggacattagagcggggtatcctccaggtgcgttatccggtgtggcctcgatatggt
agtttcctcgagccggtatcagatgatcgccacctgacggtagccactttggaggagagg
cccttcgtcatcgtagagaacgtggaccccgacacgggaacctgtgtacgcaacaccgtg
ccctgccgacgccagtccaaccgcaccgagagtattgtgggtcactcggagccctacacc
aagctgtgctgtaaggggttctgcatcgacattctgaagaaactgtctcgcaccatcaag
ttctcctacgacctctacctggtcactaacgggaaacatggaaagatgatcagtggcatc
tggaacggcatgatcggagaggtgttctacaggaaagcagacatggccataggttctctc
accataaatgaggagcgttctgagatcatcgacttctccgtgccattcgtcgagaccggc
atcagcgtcatggttgcccgtagcaatgggactgtctccccctccgccttcctcgagccc
tatagcccagcggtgtgggtgatgatgtttgtaatgtgcctgaccgtggtagctgtgact
gtattcgtgttcgagtacttcagtcctgtcggctacaaccgcagcttggtcagcgctaaa
gcggcaggaggtcctaccttcaccatagggaagtcagtgtggttgctttggggcatcgtg
ttcaataactcagtccccatcgagaaccctaaaggaaccaccagtaagatcatggtgctg
gtgtgggccttcttcgcggtcatcttcctagcctcctacaccgccaacctggctgccttc
atgatccaggagcagtacatagacactgtgtctggactgtctgacaagaagttccagaag
cctcaggaacactaccctccattccggtttgggacggtccctaacggcagcacagagagg
aacatcaggagtaactaccccgacatgcacgcacacatggtcaaatacaaccaaaaagga
gtggaggatgccctcaacagccttaagacagcgaagctggatgcttttatctatgatgct
gcggtgttgaactacatggcagggaaggacgagggctgtaagcttgtgactattggctct
gggaaggtgtttgctacaacgggctatggtatcgccctgcagaaagactctcgatggaaa
cgaccaattgacctggccttattgcagttcctgggagatggtgacacccagcgcttggag
acggtctggctgtcaggcatctgtcagaatgagaagaacgaggtgatgagcagtaagctg
gacatagacaacatggccggggtcttctacatgctgctggtggccatggggctcagtctg
ctggtgttctcctgggaacatctactctactggaaacttcacaaggaactagacaaatct
cccaggatggacttcctgctcgccatcagcaggggtatctacagttgcttcaacggggtg
gaggaaccagacctccctaacctggccaacccagacctgacagctaactatgcccaggct
aacatgctcaagatgctacgcactgctaaggacctggttaactccgcccaagtcgagacc
tcactggaccacgcctccaagaccatagaacactggggacgccatggcggcagcctgcca
gtccacattccgcagcaaggcaccacggaaacagtcccgggagggttcgcttatgtcaca
gagaatacacacctgccccccgagcgccccctcagcccacaatactgcacgctgggtgta
gcgacatctgtgaaccagcagagggggctggcgagacccacaccgctacgatacacgctc
ccggctcgtacttcctctctctacgacagaccacttcctgtttctagtctcatttgccct
caccttgacctggctgggggggaccgcctctcttcttatcctcacccctccacaggtagg
ctctatgtggacccccaacacctttcccacccccgctctcccttcatcccctatagtgag
ctccagctcccagacatctacctctcctctcacccaccctctgctgtctcccatcccccc
cacacagagccctccaagaggaagaggaggagcaagagcctcctctcaggggagacagga
agaggaggaggacagaggaggcggcgcagggaggagaagacggtgtgcctggctgaactc
cgggccaaccacctccaggaaaaccacgtctcgccccacatgcctgactccctgtaccca
ggagcggtgctctgtcctggggaagagggatgcggtggctcctggcctcttcctctggag
gagctcgtcctagcaggcagacggcggtgccaccgacggccatctttccttcgagccacc
tggggcagcgagcagattcgccagccggacgatactccgcctacatccctcgatagccaa
tcacattctgctttaccagacttatttccccgcgtcatggtcgaccaagaaactcccact
aaactctacaaccccaccccattccggaacaacctatgctatcctgccgcctcaccccgc
caacatgcttatcttcatataaggcaggaccagaggaaaggaaactcgcgtaagaagctg
cggcactcacactccacccacctgcccacctacagggaggccgtgctggggggccaggga
gggggaggtggggtaggcctgggggtggtccggagaaccaccagcctgctcagcagacag
tacaacgactatctaacctcctaccctgggctgcctctataccacagccccctcaacctc
cagacccattccccggcgtccagcaaccaccccagccccggtacctaccgtatccccaac
cctgtatgccagctcctggcctgtggaggtggctgtcgaagtcagagggggttgttgtac
caggacagtctgtatggagcctatggagcctatggaggggcccaggatccggacatagag
ccccaaagaggagagggcttggtagggttgaggtctgaggacagaccctgtgtgactcgg
ccctggggaaaagtctctagtctggagtcagaggtctga
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integrated database retrieval system
