KEGG   Oncorhynchus mykiss (rainbow trout): 110492901
Entry
110492901         CDS       T07259                                 
Symbol
hoxc13a
Name
(RefSeq) homeobox protein Hox-C13a
  KO
K09298  homeobox protein HoxA/B/C/D13
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omy03000]
    110492901 (hoxc13a)
Transcription factors [BR:omy03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    110492901 (hoxc13a)
SSDB
Motif
Pfam: HoxA13_N Homeodomain Homeobox_KN Homez
Other DBs
NCBI-GeneID: 110492901
NCBI-ProteinID: XP_021423040
Ensembl: ENSOMYG00000026880
LinkDB
Position
16:41444038..41449320
AA seq 306 aa
MTTSLVLHPRWADTLMYVYEKSPNENNPNKNQTMEGLSGNCPATHCRDLMSHPGLGRHSG
TIATHQGSVYSDISSPDTGRQCPAPQTSSSASLSYGYPFGNPYYGCRLSHSHNVNLQQKP
CSYHPAEKYADPHTALPTEEVSSRAKEFAFYPSFASSYQAVPGYLDMSVVPGISHPEPRH
DALIPMEGYQHWALSNGWDGQVYCSKEQTQSTHLWKSPFPDVVPLQPEISSYRRGRKKRV
PYTKLQLKELEKEYAASKFITKDKRRRISAGTNLSERQVTIWFQNRRVKEKKFVCKSKTS
NHTPTT
NT seq 921 nt   +upstreamnt  +downstreamnt
atgacgacttcactggttctgcatccacgctgggcggacaccttgatgtacgtttatgaa
aaaagcccgaatgaaaacaatccgaataaaaaccaaacaatggagggactgagcgggaat
tgcccggcgacccattgcagggacctgatgtcgcaccccgggttggggcgacattctggc
actatagcgactcaccagggctcggtgtactcggatatatcttccccagacaccggccga
cagtgtcctgctccccaaacctcctccagtgcatctctgagctacggttatccgtttgga
aacccttattacggttgtaggttatctcactcgcacaacgtgaacttgcagcagaagccc
tgctcgtaccaccccgcagagaaatatgccgacccccacaccgcgttgcccacggaagag
gtgtctagcagggcgaaagagttcgccttctaccccagttttgctagctcgtaccaagcg
gtccctggatatctagatatgtctgtggtgcccgggatcagccaccccgaacccaggcac
gacgcattgattcctatggagggctaccagcactgggctctgtcaaatggctgggatggg
caggtgtactgttccaaggagcaaacacagtccactcatctttggaaatccccatttcca
gacgtagtccctttgcagcctgagatcagtagctaccgtcgtggacgtaagaaacgggtt
ccctacaccaagctccaattgaaggagctggagaaagagtacgctgccagcaagttcatc
accaaagacaaaagaagacgcatctccgccgggaccaacctctcagagcgccaagtcacc
atttggttccagaaccgacgggtgaaagagaagaaatttgtctgtaaatccaagactagt
aatcacacgcctactacttga

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