Oncorhynchus mykiss (rainbow trout): 110492905
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Entry
110492905 CDS
T07259
Name
(RefSeq) iroquois-class homeodomain protein irx-1-B-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110492905
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110492905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PCB_OB
T3SSipB
MscS_TM
Motif
Other DBs
NCBI-GeneID:
110492905
NCBI-ProteinID:
XP_021423042
Ensembl:
ENSOMYG00000010312
LinkDB
All DBs
Position
16:complement(43210914..43212485)
Genome browser
AA seq
359 aa
AA seq
DB search
MTAQGYIKSSRGCTYCHSQSDSQDVRTPASQIGFGNFFFERNINMLPGYQIPGLGSQPRV
RQQQAPHLAAMTGVPLAYSGLQGYNFIPYPHYGHIAHMNNSFDLKTVSPYYEALLGRGGP
FYPQYRPGATDDPSRVAKVATRESTSALKAWLNEHLKNPYPTKGEKIMLAIVTKMSLTQV
STWFANARRRLKKENRVSWAFKGKSDEEEGESDEEKSDVTLQKSALVDEDEIDLQTVDDK
VEDIGHRVDNSTPELVDARLEKQSSDDHRDSTRAHGENYVEKSYTKRTSSPSRLGCKDNA
ECQKPKIWSLAETATSETVKKPHQDNECHPRSTEMGKFWSEWASRNGLYIPRYTAHDIL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacaggggtatattaaaagttcgcgagggtgcacatactgtcattcacaatct
gatagtcaggacgtaaggacgcctgcgtcacaaattggatttggcaacttcttctttgaa
agaaacatcaacatgctccctggatatcagataccgggtttgggatctcaacccagggta
cgacagcaacaagcccctcatcttgctgcgatgactggggtccctttggcatattcagga
ctacagggatacaactttatcccctatccacactacggacacattgcgcacatgaacaac
tccttcgacctgaagactgtctctccgtattatgaagcgcttctcggccgaggagggccg
ttctacccacaataccgaccaggcgcaactgatgacccaagcagagtcgccaaggtggct
acccgggaaagcaccagcgcgctcaaggcctggttgaacgagcatctcaagaacccatat
cctacaaagggcgagaagatcatgcttgccatcgtaaccaagatgagcctcacgcaggtg
tcaacttggtttgccaacgccaggcgacggctgaagaaggagaatagggtgagctgggcg
ttcaaggggaaatctgacgaggaggagggcgaaagcgacgaggagaagagtgatgtcact
ctgcagaaaagcgctttggttgatgaagacgaaatagatcttcaaaccgtcgatgacaag
gtggaggatattggacatagagtggacaactcaacgccagagttggtggatgcacgcctg
gagaaacaatcaagcgatgaccatagagacagcacgcgtgctcacggggaaaattatgtc
gaaaagagttacaccaaacgcacatcatccccatctcgtctaggatgtaaggacaacgct
gagtgtcaaaagcccaaaatatggtctttggcagaaaccgcgacctcggaaacggtgaaa
aagccccaccaggacaatgagtgtcatcccaggagcacagaaatgggcaaattctggtca
gaatgggcatcaaggaatggactgtatattcccagatatactgctcacgatattctttaa
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