Oncorhynchus mykiss (rainbow trout): 110493043
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Entry
110493043 CDS
T07259
Name
(RefSeq) non-muscle caldesmon isoform X2
KO
K12327
caldesmon
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
110493043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110493043
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
110493043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
110493043
NCBI-ProteinID:
XP_021423059
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Position
2:60781715..60846975
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AA seq
594 aa
AA seq
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MSRAIPRRNTSKQGLQNLLKITTQRSVEDAEEVERERRRRARESFRSMGSSSTSDPGGLS
LDNVVLAEDGLYESDLKPSSSSPSMEEDEGFSDWTQRLERRRQQAQRMEELSQAPEEQDQ
RPLNGAAKAPTPHTLSASATPTTSTSRLQRQHKAEAEDEEEKKLVRKESERKRREREEVV
REERVQKEREREEEGAKQRQEKMRVLKKREEDQRPDAKEMFQLKEKRKDVKVSYTSQVVL
QTEAKHANTNGDTVGEEMTSYMAKTKLRAPRAVVQVAGVEAEEEAEAILEAKLVKIRRSQ
AEKENQELEQLRHKQAEAEQDLEELKRRREERRQVREGEERRSREEEQQRLAKEEEEKRR
MKEDIERRRMEAAERMKSLSTSSVDGDELFSPLNPKGSIYKITERTESLNRSLKKSNSFK
KTQPPVLLAKIDDRLEQYTHAIEYSQEAKAAKQGLMDIPMSPEAVSSKKHLFEAGEAWNQ
SPSKGTPSKNAEGLKVGVADLITQWVKGNPDGTSRNSPPRPADVKAGDVMQKKNMWEIIG
ETSPGRLGAKGNPSGKRYKFVMTAHGKYAKIPVDDDEYMDEYTNGKADLPHGEY
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgcaatcccgagaagaaacaccagcaagcaaggtttgcagaacctcttgaaa
atcaccacccaaaggagcgttgaggatgcagaggaggtggagcgagagcgtcggcggagg
gcccgggagtccttccgcagtatgggcagcagcagcacctcggaccctggaggactttca
ctagacaatgtggtcctggctgaggacggcctgtatgagagtgatctgaagcctagcagc
agctctccttctatggaggaggacgagggcttcagtgactggacccagcggttggagaga
cgccggcagcaggcccagcgcatggaggagctcagtcaggccccagaggagcaggaccag
aggcccctgaacggtgccgcaaaggcccccacaccacataccctctctgcctcagccact
cccaccacatccacctctcgtctgcagagacaacacaaggcagaagcggaggatgaggaa
gagaagaagttggtaagaaaggaaagtgagaggaaaaggagggagcgagaggaggtggtg
agagaagagagggtgcaaaaggagagggagagagaagaggagggagcgaaacagaggcag
gagaagatgagggtgctcaagaagagagaggaggaccaaagaccagatgctaaggagatg
ttccagttgaaggagaagagaaaagatgtgaaggtctcctacacatcccaagtcgtcctg
cagacggaggcaaagcatgctaacaccaacggagacaccgttggggaggaaatgacttca
tatatggccaaaaccaaattaagagctcccagggctgtggtacaagtggcaggggtcgag
gctgaggaggaggcggaggccatcttagaggccaagctggtgaagatccggcgtagccaa
gcagagaaggagaaccaggagcttgagcagctcagacacaagcaggctgaggccgagcag
gatctggaggagctgaagaggaggagggaggagagacgccaggtcagggagggggaggag
cgcaggagcagggaggaggagcagcagcgcctggccaaggaggaggaagaaaagaggagg
atgaaggaggacatagagaggaggaggatggaggcagcagagaggatgaagagcctcagt
acctccagtgtggacggagatgagttgtttagcccgctcaatcctaaaggctccatctac
aagatcacagaaagaacagaatccttgaaccggtccctaaagaaaagcaacagcttcaag
aagacacagccccctgttctcctcgccaagatcgatgacaggctggagcagtacacccac
gccattgagtactcccaggaggccaaggcagccaaacagggcctgatggacatccccatg
tcacctgaggcagtgtcctccaagaagcacttgtttgaggctggagaggcttggaaccag
agcccgtccaaaggcacaccatccaagaatgctgagggtctgaaggtgggtgtggcagac
ctgatcacccagtgggtgaaggggaacccagatggcacaagcaggaactcgcccccgaga
ccagctgatgtaaaagctggtgacgtgatgcagaaaaagaacatgtgggagatcattgga
gaaacatcccctgggagattaggggcaaagggcaatccatctggtaaaaggtacaaattt
gtgatgactgctcatggcaagtatgcgaagattcctgttgatgatgatgaatatatggat
gaatacaccaatggaaaagcagacctaccccatggtgaatattga
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