Oncorhynchus mykiss (rainbow trout): 110493288
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Entry
110493288 CDS
T07259
Symbol
nckap1l
Name
(RefSeq) nck-associated protein 1-like isoform X1
KO
K05750
NCK-associated protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04810
Regulation of actin cytoskeleton
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110493288 (nckap1l)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110493288 (nckap1l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
110493288
NCBI-ProteinID:
XP_036806792
Ensembl:
ENSOMYG00000029605
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Position
17:87134096..87172285
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AA seq
1127 aa
AA seq
DB search
MAMAYQQKLAEKLTILNDRGTGVLLRMNYIKKTCLDPKLRPQYLTDKTMEASVKYINKKF
PNIDFRGNSQQYLVGIQKHKSEVMVAMSSYYDSFIDVMEFRDHVYELLNTIDACQCFFNI
AVNFDFTKNYLELIITYISVIIMLSRVEDKKVLVGMYNCAHEMSNGSSDPAYPRLAQMFM
EYEQPIKKLTEEFGPHTKGVTEALLSLQMLYPRRNLPAEQWRSAQLLSLLSAPASMLDPA
CCDTMACEYLSLEVMERWILLGYLLCHSSLNTNQSSQELWKMALRSGLYLTIIRDETINI
HKITEDYFDGLKGYSKRIADIKECREHVTVNSGAMHRERRGFLRNALKELVKVLEDEPGL
LGPKVLFVFMALSFSRDEVLWLVRYSENIPKTKTPEDYVDSQMAELLFYMERLRTLMTKY
SRVVQRYHVQYLAQFDALLLNDTMQNMYVCPEEESVLMTSFVSTLSALTIKQVENGEEFD
FRALRLDWLRLQAYTSVSKAPLSLKEYPDLAKVMNMTQFHTKMLDNVQEMLHETSDLSIL
CFYPRVFEKMFSQSSEEVSMQRYLMSFPLVCSHFNQTVHPLCPEETEAVEKRSLRLCVTF
LEEIAKQTSSVILEICSEQCNLNDQLLPKHCGQTISAARNKKQKKQTPKKGEVQREKPGT
ESQRKDRAIVTNMDKLHLTLTELCSSFSGSSDFTVFNHIVTPAEFLISHLETRLTKIIVR
MAHYNQTTQEIGRPSDLLAGIRAYTASLHTLSRYLSLDVTRLVKNVLLQQTQPLDSYGGQ
TITTLYTNWYLEGLLRQASSNLIVHCPAMHCFVNQTIENEQSFRAEEYSDISEMQALAEL
IGPYGLKFLSENLMWHITSQVGELKKLVIENMDVLVQMRANFDKPEAMANLQKRLPAGEN
VLKRMTIIGVILSFRAMAQDTLEDIMQKHCPYLMGPIESLRDMVSPDTDIKVTLTVFELA
SAAGLTCDIDPALVAAVASMRTDNSSVDEEYKLTCLLLVYIAVSLPILALDPNSYYSRHY
GGHHNNIHCLATAVNQLSAAMFTVESKNIEQHLKEFLLVASSTLLQLGQNVENRVDGKNR
DSIYLLLHMIVEASPFLSQDMLESCFPYVLLRNAYREVYKNYIITLG
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcttaccaacagaagctagctgagaagctcaccatcctcaacgacagaggg
acaggggtgctgctgcgtatgaactacattaagaagacgtgcttggatcccaagcttcgg
ccacaatacctgacagacaagaccatggaagcatctgtcaaatacatcaacaagaagttc
cccaacatcgacttcaggggaaatagtcagcagtatctggtaggcatccagaaacacaag
tctgaggtgatggtggccatgtccagctactacgactccttcatagacgttatggagttc
agggatcatgtttatgaactgctgaatacaattgatgcctgccagtgcttcttcaacatt
gcggtgaactttgacttcaccaagaactacctggagctgatcatcacatatatatctgtc
atcatcatgctttcacgcgtcgaagacaagaaggtcctggtgggcatgtacaactgtgct
cacgagatgtccaatggcagcagtgaccccgcgtacccgcgcctggctcagatgtttatg
gagtatgaacagcccattaagaaattgactgaggaattcggccctcacactaagggtgtg
acggaggccctcctgtccctacagatgttgtaccccaggaggaaccttcctgcagaacag
tggcgcagtgctcagctcctcagtctcctcagcgcacctgcctccatgctggaccctgcc
tgctgcgacaccatggcctgtgagtacttgtccttagaggtgatggagcgatggatcctt
ctgggttacctgctgtgtcatagcagtctgaacaccaaccagtcatctcaggagctgtgg
aagatggccctccgcagcggcctctatctcaccatcatcagggatgagacgatcaacatc
cataagatcacagaggactacttcgacggcctgaaagggtacagtaagcgtatcgccgat
atcaaagaatgtcgcgagcatgttacagtcaacagtggagccatgcacagagagaggaga
ggtttcctgaggaatgccttgaaggagctggtcaaagtcctggaggatgaacctggactt
ctgggacccaaggtgttgtttgtcttcatggctctgtcgttttcccgtgacgaggtcctg
tggctcgtcagatattcagagaatattcccaagaccaagactccagaggactacgtagac
tcgcagatggcggaactcctgttctacatggagaggttgaggaccctgatgactaagtac
agccgtgtggtgcaacgctaccatgtccagtacctggcccagtttgatgccctgctcctc
aacgacaccatgcagaatatgtatgtctgtccagaagaggaatcagtcctgatgacatca
tttgtctcaaccctgtctgcactgactatcaagcaagtggaaaacggagaggagtttgac
ttcagggctctgagactggactggttaagattacaggcctacaccagtgtgtccaaggcc
ccactctccctcaaggaatacccagacctggctaaagtgatgaacatgacccaattccac
accaagatgttggacaacgtgcaggagatgcttcacgaaacctcagatctctccattctc
tgcttctacccgcgggtgtttgagaagatgttctctcagagcagcgaggaggtttctatg
cagcgctacctcatgtctttccctctggtctgctcccacttcaaccagactgtccatccg
ctctgtccagaagagacggaggctgttgagaagaggagtctgcgtctgtgtgtgaccttc
ctggaggagattgccaaacagaccagctccgtcatcttagagatctgtagcgaacagtgc
aacctcaatgaccagctgttgcccaaacactgtggccagaccataagtgcagctcgcaac
aagaagcagaagaaacagacgccgaaaaaaggagaagtgcagagagagaaacctggaacg
gagagtcagaggaaggaccgtgccatcgtcaccaatatggacaagctgcatctgactctg
actgagctgtgctcctcattcagtgggagcagtgacttcacagtgttcaaccacatcgtc
actcctgcagagttcctcatatctcacttggagacacgcctcaccaagatcatcgtgaga
atggcccattacaaccagaccacccaggaaataggacgtccgtctgaccttctggccggg
attcgggcctacacagccagcctacacaccctgtcacgctacctcagtctggacgtcact
aggctggtcaagaatgtcctactgcagcagacgcagccactggactcatacggaggacag
accatcaccacgctgtataccaactggtacctagagggccttctgcgtcaggccagcagc
aacctgatcgttcactgccctgcaatgcactgcttcgtcaaccagaccatcgagaacgag
cagagtttcagagcagaggagtactctgatatctcagagatgcaggccctggctgagctg
attggtccgtacggtctcaagttcctcagtgagaacctgatgtggcacatcacctcacaa
gtcggagaactcaagaaactggtgatagaaaacatggacgtgctagttcagatgagagct
aactttgacaaacctgaggccatggctaacctccagaagagactgcctgcgggagagaac
gtcctgaagaggatgaccatcatcggagtgatcctgtcctttagagccatggctcaggac
acactggaagacatcatgcagaagcattgcccctacctgatggggcccattgagagccta
agggacatggtctcccctgacacagacatcaaggtaaccctgacggtgtttgagctggcg
tctgcagcaggactgacttgtgacatcgaccctgctttggtggcagccgtcgctagtatg
cgtacagataactcatctgttgatgaggagtacaagctaacctgccttctcctggtttac
atcgccgtgtctctgcccatcctggctttggatcccaactcctactacagcagacattat
ggtgggcaccacaacaacatccactgtctggccacggccgtcaaccagctgtccgcagcc
atgttcaccgtcgagagcaagaacatagagcagcaccttaaggagttccttctggttgcg
tcttccaccctgctccagctgggtcagaatgtagagaacagggtggacggcaagaacaga
gactccatctaccttctcctgcacatgatcgtggaggcgtcgccgttcctgagccaggac
atgttggagagctgtttcccttatgtcctgctgaggaacgcctacagagaggtctacaag
aactatatcattacactgggctaa
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