Oncorhynchus mykiss (rainbow trout): 110493298
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Entry
110493298 CDS
T07259
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110493298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110493298
03036 Chromosome and associated proteins [BR:
omy03036
]
110493298
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110493298
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110493298
PBAF complex
110493298
GBAF(ncBAF) complex
110493298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
110493298
NCBI-ProteinID:
XP_036806814
UniProt:
A0A8K9XQY4
LinkDB
All DBs
Position
17:88035364..88073938
Genome browser
AA seq
514 aa
AA seq
DB search
MAARGSFQSASTGGGGGGMGPGPPVQGGGPGMGPGTPGGRMGPSSGAQNHLYRSPMPGPG
YPRPGGMPPSSRMTPQGPPMGPPGYGSSPVSRPGMPSVMDPSRKRPAPQQIQQVQQQRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGDGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAEF
YFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggtagttttcaatcagcttcaacgggaggtggtggcgggggaatggga
cccggacccccggtacaaggtggaggaccaggcatgggacctggaactcctggaggaagg
atgggaccctcatcgggcgcacagaaccacctctatcgctctccgatgcctgggcctgga
tacccgagaccaggtgggatgcccccatccagccgtatgaccccccagggcccgcccatg
gggcctccaggctacggctccagccctgtgtcccgaccagggatgcccagtgtcatggac
ccctcccgtaaaaggccggccccccagcagatccagcaggtccaacagcagcgcaaccaa
cataccaagaagaagaagatggcggataagattttacctcagaggatccgggagctggtg
ccagagtctcaggcctacatggacctgctggcgtttgagaggaagctggaccagaccatc
atgaggaaacgtctggacatccaggaggcactcaagagacccatcaagcaaaagcgaaag
cttcgtatcttcatatccaacacgttcaaccctgccaagcccgacgcagaagacggggat
ggcactgtagcatcgtgggagttgcgtgtcgaaggacgcctgcttgaagatactgctgtg
tccaagtatgaagcaaccaagcaaaagagaaagttctcttccttcttcaagtctctggtc
atcgagttggacaaggacctctatgggcctgacaatcacttggtcgagtggcacaggacc
gcgaccactcaggagacagacgggttccaggtgaagaggccaggtgatgtcggggtacgc
tgcactgtcctgctgatgctggactaccagccccctcagttcaagttggaccctcgcctg
gcccgtatgttggggatccacacccagaccaggccggtcatcatccaggcactctggcag
tatgttaagacccacaagctgcaggacccccacgagagagagttcatcaactgtgacaag
tacctgcagcagatctttgagactcagcgtatgaagttctctgagatcccccagcgtctc
catgctctcctgatgcctccagaacccatcatcattaaccatgtcatcagtgtggatccc
aacgaccagaagaagacggcctgctatgacatcgatgtggaggtggacgacactctgaag
acccagatgaactccttcctcctatccaccgccagccagcaggagatagctggcctggac
aacaagatccatgagaccatagagacgatcaaccagctgaagacccagagagagttcatg
ttgagcttcgccagagacccccagggcttcatcaacgactggctgcaatcacagtgccgg
gacctcaagactatgactgatgttgttgcgaacccagaagaagagaggagagccgagttc
tatttccaaccctgggcccaggaggccgtgtgtcgttacttctactccaaggtccaacag
aggcgtcaggagctggaacaggccctgggcatcagaaacacctag
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