Oncorhynchus mykiss (rainbow trout): 110493311
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Entry
110493311 CDS
T07259
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110493311 (tmc6b)
03037 Cilium and associated proteins [BR:
omy03037
]
110493311 (tmc6b)
Transporters [BR:
omy02000
]
Other transporters
Pores ion channels [TC:
1
]
110493311 (tmc6b)
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110493311 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF3576
Motif
Other DBs
NCBI-GeneID:
110493311
NCBI-ProteinID:
XP_036803884
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All DBs
Position
17:complement(13459621..13501211)
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AA seq
840 aa
AA seq
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MAHSVNFYLTAEHMEAGLESPADEEGVHDSFNQLIEDQRQEALELQELQRDLDEEERDSV
AYLSSPGQEIWRGSPGRGEEEGGGQLDPLLEERWSSATLKVLSSMPSRTIGRSGGAVISQ
YYNRTMKLRRRRQSRPSIKDFSRSARPSIRGYGMETDCMETEGVDEEGRKRDQLVNNLQN
LSLSDRVRMLRAMPLSVAEKSELRRLADRKGRRSNHSQIPCCSQLKYHIIIALRHSWYSC
LSFLHSLQLWQVALKRVSGRFGTGVLSYFLFVKTLLFFNIFLFLVTGLLLAVPQAVHPPT
LTQGHEAFSGLELLTGGGYFSDSVMYYGYYSNSTLSKDCRVTSSSMEQQPSPSVSRRTME
TDCGVKPSYNMPLAYFFTIGLAFFITCIILVYSMSKSFGQSFRIDKSHGILAMKVFCSWD
FKVIKKTSVKLRSENICIQLRELLEETSRKHVQKTACQRIGRVLVHVLAWFICIGSTVAC
VLALYYFSEYMHKDLQYRSRIPTKDPLLKEASLLALPVVVSLINLLLPGIFNATAWMEEY
DSPSVNTYIAISRNLMLKVSVLVVLCFHWLGRIASDPHSIGLQCWESFVGQELYRFLLMD
FIFTILDTFFGEFLWRLFSQRVLKRKRKPVFDISRNVLELIYGQTLAWLGVLFTPLLPAV
QIIKLLLLFYMKQTSVMMNCQSPRKPYRASQMSTIFITLLCCPSFLGAAVCVSYTMWSIR
PSESCGPFRSLSTMFQSGKLWVKELETHNPNLAWLAWAHSYIVENPLFLFLAAGIFLIVI
YFNTQVVDGQRKIISLLQEQIENEGEDKKFLITRLQAIHQQKRPLSPRRLTSQASQDSNC
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggctcacagtgtcaacttttacctgactgctgagcacatggaggctggcctggagagc
ccagcggatgaagagggggtccatgactcctttaaccagctgatagaggatcagagacag
gaagccttggagctgcaggaactgcagagagacctggacgaggaggaacgagacagtgta
gcgtacctgtccagccctggtcaggagatatggcgtgggagcccggggaggggtgaggag
gaaggggggggacagttagacccccttctagaggaacgctggtcctccgccaccctcaaa
gttctctcctccatgcccagccgcaccatcggtcgtagtggaggtgctgtcatctctcag
tactataacaggaccatgaagttgagaagacgcagacagagcaggccttccataaaggac
ttttcccgctccgcacggcccagtatccgtggttacggcatggagacagactgcatggag
accgagggcgtggatgaggaggggcgtaagcgtgaccaactggtcaacaaccttcagaac
ctctctctgagtgaccgggtcaggatgctgcgagccatgcctctctctgtggcagagaag
agtgagctaaggaggttggctgacaggaagggtcgacgctccaatcacagtcagatcccc
tgttgcagccagctcaagtatcacatcatcatcgctctgagacatagctggtacagttgt
ctttccttcctccactccctacagctgtggcaggtggcgctgaagagggtgagcggtcgt
ttcggcaccggcgtcctctcttacttcctgttcgtcaagaccctcctcttcttcaacatc
ttcctgttcctggtcacgggtttgttgctggccgtgccccaggcagtacacccccccaca
ttaacccagggacacgaagccttctctgggctggagctgctcactggagggggttatttc
tcagactcagtgatgtactatggttactatagtaactctaccctgtctaaggactgtaga
gtcactagtagcagtatggagcagcagcccagtccctctgtatctagaaggacaatggaa
acagactgtggagtgaagccgtcctacaacatgcccctggcttacttcttcaccatagga
ctggctttcttcatcacctgcatcatcctcgtctacagcatgtccaagtcgtttggtcag
agtttccgtatcgacaagtcacatggtatcctggcgatgaaggtgttctgttcctgggac
tttaaagtcatcaagaaaacctccgtcaaactccggtctgaaaacatctgcattcaactc
agggagttgttagaggagacgagtcgtaagcatgtccagaagactgcgtgtcagagaata
ggacgtgtgctggtacatgttctggcctggttcatctgtatcggcagtacagtggcctgt
gttctagctctctactacttctctgagtacatgcacaaggacctccagtacagatctcgt
attcccactaaggaccctctcctgaaggaagccagtctgttggccctgccagtcgtagtg
tctctcatcaacctcctgctccctggcatcttcaacgctactgcctggatggaggagtac
gactcgcccagcgtaaacacatacatcgccatcagcaggaacctgatgttgaaagtgagc
gtgctggtagtgctgtgcttccattggctgggccggatcgcttctgacccccacagcatc
ggcctgcagtgctgggagagttttgtaggacaagagctgtaccgcttcctcctcatggac
ttcatctttaccatactggacaccttctttggagagttcctctggaggttgttttctcag
agggtgttgaagaggaaaagaaagcctgtgtttgacatctccaggaacgtgttggaactc
atctacggacagacactggcctggttgggggtgttgttcactcctctgcttcctgctgta
cagatcatcaaactactgcttctcttctacatgaagcagactagtgtgatgatgaactgc
cagtcccctaggaagccctatagggccagtcagatgagcaccatcttcatcactctcctc
tgctgcccttccttcctgggggctgctgtttgtgttagctacaccatgtggagtatccgt
ccgtctgagtcatgcggtccgttccgcagcctgtccactatgttccagtcagggaagctg
tgggtgaaggagttggagacacacaaccctaacctggcctggttagcctgggctcacagt
tacatagtggagaaccctctgtttctgttcctcgctgctgggatcttcctgatagtgatt
tacttcaacacccaggtggtggatggacagaggaagattatcagtctgctgcaggagcaa
atagaaaacgagggggaggataagaagttcctgatcactcgtctccaggccatccaccag
cagaaacgacccctctcccctcgcagactcaccagtcaggccagtcaggattccaactgt
tag
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