Oncorhynchus mykiss (rainbow trout): 110493396
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Entry
110493396 CDS
T07259
Symbol
samd1b
Name
(RefSeq) atherin isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110493396 (samd1b)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
110493396 (samd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_PNT
SAM_2
Motif
Other DBs
NCBI-GeneID:
110493396
NCBI-ProteinID:
XP_036804861
Ensembl:
ENSOMYG00000005294
LinkDB
All DBs
Position
17:11883484..11895681
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AA seq
665 aa
AA seq
DB search
MSESKYRDWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTREELEKLIQEQTVLKV
SYKGSISYRNAAKVQRKSRKKSDFTPGSGGGREVEGEQAKHSSLNNNGDSAHSFTDLEEV
ESRDREEDSVSEPSECPDPRPETPGITSEKKQKLFPLNSGNGPGYCPGCGETGCAAGRGC
SGKASASKDKRLGERGGGDQEGGGSSALAGNHETKPGQDGSGAPSKAKGVWGGGGGVETT
GQEGSSSCVGVAAETENKMSQGSASSSSSSNSHLLRPKQLQPESPPVKPKLRAGRGEGNP
GFGGSGQTSSDLGERLIASVRRLAEQNRASALRGETRGGHKPLGLKEILGYLTSQDGLSS
EGKLTRNRVKVVLEREVARGRLRRTRCGNITLPVRGVEAAPTPAKPPGPANRLLKSALQD
KHIGKKEVKEEEPMETESGEEEEDEEEKGTGDAEDGGQSDTQTSGGEEGSKGGTCPAPVP
METEPRNGDDITGGSEGQAGVKQEDKQPEHTTNTVSPEQIHTDTQDQNVVQSERESHTSS
VHNHNCSACKTEVGVSSCLLTPTASPRDSGLAEERGMNGGVFVKSELGSLNPVNWTVSDV
VCYFTTAGFPEQALAFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQRTH
FEEDD
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatccaagtaccgggactggatcctcgagaccatcgactctctacgctcacgg
aaagcccgaccggaccttgagagaatatgtcgtatggtccggagaagacacggctcggat
ccagacagaacccgagaggaactggagaaactgatccaggagcaaacagtgctcaaagtt
agctacaagggctccatatcctacaggaatgcggcgaaggtgcagagaaagagtcgaaag
aagagtgacttcacgccgggtagcggcggcggtagggaggtggagggagagcaagccaaa
cactccagtttgaacaacaacggggacagcgcgcacagctttaccgacctagaggaggtg
gagagccgggaccgagaggaggattctgtctccgagccgagtgagtgcccggacccccgg
cccgaaaccccgggtatcacctccgagaaaaaacaaaagctttttccactgaatagcgga
aacggccctggctactgcccgggttgtggcgaaacgggctgtgctgccgggagaggctgc
agtgggaaagcaagtgcgtcaaaagacaagagattaggagaaagaggaggaggagatcag
gaggggggtggcagcagtgctttggccggcaaccacgaaacaaaaccgggccaagatggg
agcggcgctccgagcaaagcaaagggggtctggggtggaggaggtggggtggagacgacg
gggcaggagggcagcagtagctgcgtcggtgttgctgctgaaacggaaaataaaatgagc
cagggaagcgccagttcaagttccagcagcaacagccacctcctgcggccgaaacagctt
cagccagaatccccacctgtcaaacccaaactccgggccggacgaggtgaggggaatccg
gggttcgggggcagcgggcaaaccagctcggatttgggcgaaagactgatcgcctccgtc
cgcagactagccgagcagaaccgagcctccgcgttaagaggggagacccgcgggggccac
aagccactgggactgaaggagatcctgggttacctgaccagccaagacggcctctcatct
gagggtaagctgacccgcaacagggtcaaggtggttctggagagagaggtggcgagaggt
cggctgcggaggacccggtgtgggaacatcactctcccggtgaggggagtggaggcagcg
ccaaccccagcgaagccacccggccccgctaacagactgctgaagagcgcactgcaggat
aagcacattgggaaaaaggaggtgaaagaggaggagccaatggagacagagagtggagag
gaggaggaggatgaagaggagaagggaacaggggatgctgaggatggggggcagagtgac
acccaaacctcagggggtgaggagggttctaagggggggacttgccctgccccggttccc
atggaaacggaacccaggaatggtgatgacatcactggaggttctgagggacaggcgggg
gtgaagcaggaggacaaacaaccggaacacacaaccaatacggtctctccagagcagata
cacacagacacacaggatcagaatgtggtacagtcagagagagagagccacacttcctct
gtccacaaccacaactgttcggcctgtaagacagaggtgggtgtgtcctcctgtctcctc
actcccaccgcctcacctagagactctggcctggcagaggagagagggatgaacggagga
gtgtttgtgaagtctgagctgggcagtctaaacccagtcaactggacagtgtctgatgtg
gtctgttatttcacaacagcagggtttccagaacaggccttagccttcaggactcaggag
atagatgggaagtccctcctcctgatgcagcgtaacgatgtcctgacaggcctctcaatc
agattaggccccgccctgaagatctatgagcgccatgtgaaggttctgcagagaacacac
tttgaagaggacgactga
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