KEGG   Oncorhynchus mykiss (rainbow trout): 110493396
Entry
110493396         CDS       T07259                                 
Symbol
samd1b
Name
(RefSeq) atherin isoform X1
  KO
K26266  sterile alpha motif domain-containing protein 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:omy03036]
    110493396 (samd1b)
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Other PRC associated proteins
     110493396 (samd1b)
SSDB
Motif
Pfam: SAMD1_SHD SAMD1_WH SAM_1 SAM_PNT SAM_2
Other DBs
NCBI-GeneID: 110493396
NCBI-ProteinID: XP_036804861
Ensembl: ENSOMYG00000005294
LinkDB
Position
17:11883484..11895681
AA seq 665 aa
MSESKYRDWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTREELEKLIQEQTVLKV
SYKGSISYRNAAKVQRKSRKKSDFTPGSGGGREVEGEQAKHSSLNNNGDSAHSFTDLEEV
ESRDREEDSVSEPSECPDPRPETPGITSEKKQKLFPLNSGNGPGYCPGCGETGCAAGRGC
SGKASASKDKRLGERGGGDQEGGGSSALAGNHETKPGQDGSGAPSKAKGVWGGGGGVETT
GQEGSSSCVGVAAETENKMSQGSASSSSSSNSHLLRPKQLQPESPPVKPKLRAGRGEGNP
GFGGSGQTSSDLGERLIASVRRLAEQNRASALRGETRGGHKPLGLKEILGYLTSQDGLSS
EGKLTRNRVKVVLEREVARGRLRRTRCGNITLPVRGVEAAPTPAKPPGPANRLLKSALQD
KHIGKKEVKEEEPMETESGEEEEDEEEKGTGDAEDGGQSDTQTSGGEEGSKGGTCPAPVP
METEPRNGDDITGGSEGQAGVKQEDKQPEHTTNTVSPEQIHTDTQDQNVVQSERESHTSS
VHNHNCSACKTEVGVSSCLLTPTASPRDSGLAEERGMNGGVFVKSELGSLNPVNWTVSDV
VCYFTTAGFPEQALAFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQRTH
FEEDD
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgtccgaatccaagtaccgggactggatcctcgagaccatcgactctctacgctcacgg
aaagcccgaccggaccttgagagaatatgtcgtatggtccggagaagacacggctcggat
ccagacagaacccgagaggaactggagaaactgatccaggagcaaacagtgctcaaagtt
agctacaagggctccatatcctacaggaatgcggcgaaggtgcagagaaagagtcgaaag
aagagtgacttcacgccgggtagcggcggcggtagggaggtggagggagagcaagccaaa
cactccagtttgaacaacaacggggacagcgcgcacagctttaccgacctagaggaggtg
gagagccgggaccgagaggaggattctgtctccgagccgagtgagtgcccggacccccgg
cccgaaaccccgggtatcacctccgagaaaaaacaaaagctttttccactgaatagcgga
aacggccctggctactgcccgggttgtggcgaaacgggctgtgctgccgggagaggctgc
agtgggaaagcaagtgcgtcaaaagacaagagattaggagaaagaggaggaggagatcag
gaggggggtggcagcagtgctttggccggcaaccacgaaacaaaaccgggccaagatggg
agcggcgctccgagcaaagcaaagggggtctggggtggaggaggtggggtggagacgacg
gggcaggagggcagcagtagctgcgtcggtgttgctgctgaaacggaaaataaaatgagc
cagggaagcgccagttcaagttccagcagcaacagccacctcctgcggccgaaacagctt
cagccagaatccccacctgtcaaacccaaactccgggccggacgaggtgaggggaatccg
gggttcgggggcagcgggcaaaccagctcggatttgggcgaaagactgatcgcctccgtc
cgcagactagccgagcagaaccgagcctccgcgttaagaggggagacccgcgggggccac
aagccactgggactgaaggagatcctgggttacctgaccagccaagacggcctctcatct
gagggtaagctgacccgcaacagggtcaaggtggttctggagagagaggtggcgagaggt
cggctgcggaggacccggtgtgggaacatcactctcccggtgaggggagtggaggcagcg
ccaaccccagcgaagccacccggccccgctaacagactgctgaagagcgcactgcaggat
aagcacattgggaaaaaggaggtgaaagaggaggagccaatggagacagagagtggagag
gaggaggaggatgaagaggagaagggaacaggggatgctgaggatggggggcagagtgac
acccaaacctcagggggtgaggagggttctaagggggggacttgccctgccccggttccc
atggaaacggaacccaggaatggtgatgacatcactggaggttctgagggacaggcgggg
gtgaagcaggaggacaaacaaccggaacacacaaccaatacggtctctccagagcagata
cacacagacacacaggatcagaatgtggtacagtcagagagagagagccacacttcctct
gtccacaaccacaactgttcggcctgtaagacagaggtgggtgtgtcctcctgtctcctc
actcccaccgcctcacctagagactctggcctggcagaggagagagggatgaacggagga
gtgtttgtgaagtctgagctgggcagtctaaacccagtcaactggacagtgtctgatgtg
gtctgttatttcacaacagcagggtttccagaacaggccttagccttcaggactcaggag
atagatgggaagtccctcctcctgatgcagcgtaacgatgtcctgacaggcctctcaatc
agattaggccccgccctgaagatctatgagcgccatgtgaaggttctgcagagaacacac
tttgaagaggacgactga

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