Oncorhynchus mykiss (rainbow trout): 110493428
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Entry
110493428 CDS
T07259
Name
(RefSeq) RNA-binding protein 20
KO
K24052
RNA-binding protein 20
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110493428
Spliceosome [BR:
omy03041
]
Complex A
Other components
Complex A specific factors
110493428
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
HR1
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
110493428
NCBI-ProteinID:
XP_036798486
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All DBs
Position
13:12260146..12332179
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AA seq
1308 aa
AA seq
DB search
MQQAWDKALFEAHIEGVKNGQTGEMSGKSQGGYMGTKTSNEHFQSTSLSDGNDNKPQPVG
GVQGQLSGGGGTHQNHQNTQLLLTPASIQLAQLQAQLTFHRLKLAQSAVGGNANSANAAS
ILNQVLANVAMSQPLFNQLRASAMVSNPQAVGGGFHSSALAFQLPPPPPPPPPPPNSALG
TLVGAGFNQNHGNLRLNHYGGGGVSGNQQQQQQANQHGGSDYGKKAGSTYPSDMDRHLQY
GFTGGTSVALSEAGEGQGQYVPIMTQAKSTNQGFQIDFYGQSQQQQAGFGVGNQNDQNKN
PFNEQQWKSPANMSHAEKGLDMVSNTATVWMGTGQPVRAREELYNPEEPTSDPKLNSGGG
GVTSSFGAGMGGTKGFVGYHKQPLQGGEETLSTGGSVQLQPHQLNDFHTVTPSHLPHQCT
ICEKKVYNLKDWDQHVKGKLHLQNRLLYSEGATITAGAVYYGPAGSSEGCLNNVGVNNSM
AYSSTANQDVSSGANLPAGVMRTYPMSGAGFTQLPPGSKTFPPRKSITGRVVHICNLPEG
SCTENDVINLGLPFGKVTNYILMRSTHQAFVEMAYIEAAQAMVQYYQLTPAMINDQKLLI
RMSKRYKELQLKKPGKDVDSIIQDINSLRERDEMQETDHYMPERARSRSPISRSLSPRSH
SPSFTSCSSAHSPQGAPCRGGPERGSWTAKHMRKGDEDREREREREEVPWRNGGTVDDDR
LNGRMQDRRNRPYLKPSDRDRISPRSADERGGGRGEGMRGGNRGGDWYPHPRCSPQGMPP
FPPYRNMDEDSYKTQHVYKSEKPLRPQYQRHEEGRVKSKRRDGGDYHRSRHSESDLGEES
LPTRTGEDRRQRGGSPTWGRSKKPTMRHGTEKPEIEITENNGETAEDQRSKEKSVSPQRS
SKHEREKDSEVEEWESGDDTEGECWYPKNMEELVTVDEVGEDDSIIEPDLPELQDDEDVS
ASDLHKDPTEEEEEEGEAPRSTSTPSPRPCSEKELAQREDTELGRGGGVGGVVDPIPTEQ
KDGEISTNPSPTDQSLPQPQPQPQPLPLPQPQSQPQQQPQPQSQSLPQPQQQSLPQPQPQ
SQPQPQSLPQPQSQSLPQSQSQPQPLPQPLPQPQPLSLPQSQPPIPVASEQLSSDLDDFP
NPEFKAALEETCLEAEVLKSGAPTQELALTNHAGACESSKTQDVIHKMEDVGREVTVMKP
DIQQHKNETPRVIQNSTHPINLIDIGAPSPSRGQEKIISEHSIPLGVEFIVPSTGFYCKL
CGLFYTSEETAKTSHCRSTVHYRNLQKYLSQLAEESLLGALTDPSATE
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggcctgggataaggctctcttcgaggctcacatcgaaggtgtcaagaacggc
caaactggtgaaatgtcggggaaaagccaaggaggatatatgggaaccaagacgtccaac
gaacacttccagagcaccagcctgtccgacggcaatgataacaagccccagccagtgggt
ggtgtccagggccaactgagtggtgggggtgggacccaccagaaccaccagaacacacag
ctcctcttgacacccgccagtatccagctagcccagctccaggcccagctcaccttccac
cgccttaaactggcccagagtgctgtggggggcaacgcaaactctgcaaacgcagccagc
atcctcaatcaggtccttgccaatgtggccatgtcccagcccctcttcaaccagctccgc
gcctcggccatggtcagtaatccccaagcagttggtggtggtttccactccagtgcccta
gccttccaactgcctccaccaccgccgccaccgccgccaccccccaactctgcccttggg
actttggtaggggccggattcaaccagaatcatggtaatctgaggctgaaccattacgga
ggtgggggtgtttctgggaaccaacagcagcagcaacaggccaaccagcatggtggatca
gactacggtaagaaagctggctcaacatacccttcagatatggataggcatctccagtat
ggcttcacaggggggacgtcggtggcgttgagtgaagccggagagggacaaggacagtac
gtaccaatcatgactcaggcaaagagtacaaaccaaggctttcagattgacttctatggt
cagagtcaacaacaacaggctgggttcggtgttgggaatcaaaacgatcagaacaagaac
ccttttaatgagcagcagtggaaaagcccagctaacatgagccacgcggaaaaagggttg
gacatggtttccaatactgccacagtatggatggggactgggcagccagtccgtgccaga
gaggaactgtacaatccagaggagccaacctctgaccccaagttaaattccggcggtggg
ggagttacttcctcgttcggagcaggcatgggtggcaccaaggggtttgtgggataccac
aagcagcccctgcaggggggagaggagaccctgtctacaggtggttccgtacaactccaa
cctcaccagctgaatgacttccacaccgtgacgccatcacacctgccccaccagtgcacc
atctgtgagaagaaggtctataacctcaaggactgggaccagcacgtgaaaggtaaacta
cacctgcagaaccgcttgctgtactctgaaggtgctacaatcacagctggagccgtctac
tacggtcctgccgggtcgtctgaaggatgcctaaacaacgtcggagtgaataactccatg
gcttactcttccaccgccaatcaagatgtatcatccggagctaacctaccagctggagta
atgagaacctatcccatgtcaggggctggatttacccaactcccacctgggtcaaagaca
tttccacccaggaaatcaatcacaggacgggtcgtccacatctgcaacctccccgagggc
agctgcacagagaatgatgtcatcaacctgggactgcccttcgggaaagtcaccaactac
atcctcatgcgctctacccaccaggcgtttgtggagatggcgtacattgaggcggcccag
gctatggttcaatactaccagctgactccagccatgatcaacgatcagaaactactgatc
aggatgtccaagagatacaaggagcttcagctcaagaaaccagggaaagacgttgattca
atcatccaggatatcaactccctgagggaaagggacgagatgcaggagactgatcactac
atgccagagagagcgcggtcccgtagtcccatcagccgctctctgagccctcgctcccac
agccccagctttacctcctgtagttcagcccacagcccgcagggggcaccctgccgagga
ggcccggaacggggctcctggaccgccaaacacatgagaaagggggacgaggacagagaa
cgagagagggaaagggaggaggtgccatggaggaacggaggtacagtggatgacgatagg
ctgaacgggaggatgcaggatcgacggaacaggccatacctgaaaccctccgaccgagac
cggatcagtcccagatcagcggacgaaagaggaggaggaagaggggaggggatgaggggg
gggaacagggggggagattggtacccccacccgaggtgtagccctcaggggatgcccccc
ttccctccgtacaggaacatggatgaggactcctacaaaacacagcatgtgtataagtca
gagaagcccctgaggccacagtaccagagacatgaggaggggagagtcaagtcaaagagg
agggatggaggggactaccacagatccagacactcagagtcagatctgggagaggagtct
ctacccaccaggacaggagaagacagaagacagagaggaggctccccgacatggggaagg
agcaagaaacccaccatgagacacgggacggagaaaccggaaatagagattactgaaaat
aacggagaaaccgctgaggatcagcgatccaaagagaagtctgtttctcctcaacgaagt
agcaagcatgagagagaaaaagacagcgaggtggaggagtgggagagtggggacgacaca
gagggtgagtgctggtaccccaagaacatggaggagctggtcacagtggacgaggtagga
gaggacgactccatcatcgaaccggacctccctgagctgcaggatgacgaggacgtgtca
gcctcagacctccacaaggatcctacggaggaggaggaggaagagggggaggctccacga
tcaacctccacccccagtcccaggccctgctctgagaaggagttagcccagagagaggat
actgagttgggtagaggaggtggggtaggtggggtggtggatcctatacctacagagcag
aaagatggggagattagcacaaaccccagccccacagaccagtcactgccacagccacag
ccacagccacagccactgccactgccacagccacagtcacagccacagcaacaaccacag
ccacagtcacagtcactgccacaaccacagcagcagtcactgccacagccacagccacag
tcacagccacaaccacagtcactgccacagccacagtcacagtcactgccacagtcacag
tcacagccacagccactgccacagccactgccacagccacagccactgtcactgccacag
tcacagccacccatcccagtagcctcagaacagctcagttcagatctggatgatttcccc
aacccggagttcaaggcagccctggaagagacgtgtttggaagctgaagtactgaagagt
ggagcgccgacgcaggagctggcgctaaccaatcacgctggcgcgtgtgaaagcagcaag
acccaggatgtaatacacaagatggaggatgtggggagggaagtaacagtcatgaagcca
gacatacagcagcacaagaatgagactcctagagtcatccagaattcaacacatcctata
aacctgatagacataggggctccctcaccttctagagggcaggagaagattatcagtgaa
cacagcatccctctgggggtggagttcatcgtgcccagtacagggttctactgtaagctg
tgtggcctgttctacaccagcgaggagacagccaagacctctcactgtcgtagtactgtc
cactacaggaatcttcagaagtacctgtctcagctggcagaggagagtctacttggtgca
ctaactgacccctcagctacagagtga
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