Oncorhynchus mykiss (rainbow trout): 110493445
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Entry
110493445 CDS
T07259
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110493445
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110493445
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110493445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110493445
NCBI-ProteinID:
XP_021423387
Ensembl:
ENSOMYG00000010366
LinkDB
All DBs
Position
17:21367594..21377704
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AA seq
662 aa
AA seq
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MRGSSSYGDRDRDRGRDRGPRFGSSSWGGPPPMKKFGNPGERLRKKKWDLDELPKFEKNF
YNEHPELQRMTQYDIDEFRRRKEITVRGTGCPRAITGFHQAQFPQYVMDVLLSQDFKEPT
SIQSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE
LAQQVQQVAHDYGKTSRIKSTCVYGGAPKGPQIRDLERGTEICIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLRDYV
QINVGALELSANHNILQIVDVCMENEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDELT
RRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDIKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVNSG
HGGGGGGRMRYRGGGSSANNPNMMFQDVCERRLRSVSGGNKPDSRGSSFSRDGRSGGGRD
GDPRSSSSSSNRDRSRVSRGSYGSGGADQYQSYGGGGGGTQYSSRAGGAANGAPRGSSGG
GQNQSSQPQGVFGPAPPPPVGPKPLMAQLMAPPQPPLMSFIGQPPYPFTPPPPPPPTPPP
RK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagttcgtcgtacggagaccgagatagagaccgtggacgagacagagggcct
cggtttgggtccagtagctggggcggccctccccctatgaagaagtttgggaaccctgga
gaacgccttcgcaagaagaagtgggatctggacgagctgcccaagtttgagaagaacttc
tacaatgagcacccagagctccagcgcatgactcagtatgacatagatgagttccgcagg
aggaaggagatcacagtcagaggtactggctgccccagggccatcaccggcttccaccaa
gcacagtttccccagtatgtaatggatgtgctactgagtcaggacttcaaggagcccaca
tccatccagtcacagggcttccctctggccctgagtggcagggacatggtgggcatcgct
cagactggctccggcaagaccctggcatatctgcttcctgccattgtgcacatcaaccat
cagccctatctagagaggggagacggacctatttgcctggtcctggccccgaccagagag
ttggcccagcaggtgcagcaggtggctcatgattatggcaagacctcccgcatcaagagt
acctgtgtctatggaggagcacccaagggaccgcagatacgtgacctggagagaggtaca
gagatctgcatcgccaccccggggcgtctcatagacttcctggaggcagggaagaccaac
ctgcggcgctgcacctacctggtgctggacgaggctgaccgcatgctggacatgggcttc
gaaccacagatacgcaagatcgtggaccagatccggccggaccggcagactctgatgtgg
agtgccacctggcccaaggatgtgcgtcagctggcagaggacttcctgcgggattatgtc
cagatcaacgtaggagctctggagctcagcgccaaccacaacatcctgcagatagtagac
gtctgcatggagaacgagaaggacaacaagctgctccagctgatggaagagatcatggct
gagaaggagaacaagaccatcatctttgtggagacaaagaagcgctgtgacgagctcacc
cgcaggatgagaagagatgggtggccagccatgtgtatccatggggacaagagccagcca
gagagagactgggttctgactgaattccgtagcggcaaagcccctatcctcatcgccact
gacgtggcgtctcgcggtctggacgtggaggatatcaagtttgtcatcaactatgactac
cccaactcgtctgaggactacgtgcacaggatcggccgtacagcccgcagcaccaacaag
ggcacggcctacaccttcttcaccccgggtaacctgcgccaggccagggacctggtccga
gtcctggaggaggcccggcaggccatcaatcccaaactgctgcagctggttaactctgga
catgggggaggaggtggtggcaggatgcgttaccgtggcggcggctccagcgccaacaac
cccaacatgatgttccaggacgtgtgtgagcgtcgcttgcgctccgtcagcgggggtaac
aagccagacagccgcggcagcagttttagccgggacgggcgcagtggcgggggtcgggat
ggagaccctaggtcctcatcctcttcctccaacagggaccgaagcagggtcagccggggg
agttacggctccgggggggccgaccaataccagagctatggtggtggtggtggtggtacc
cagtacagctccagggctgggggagcagctaatggggcccctaggggtagtagtggtggg
ggccagaatcagtccagtcagccccagggtgtgttcggtccagctcctccacctccagta
gggcccaagcccctcatggcccagctgatggccccgccacagccccctctcatgagcttc
atagggcagcctccgtaccccttcactcctcccccaccgccgcctcctacacccccaccc
aggaagtag
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