Oncorhynchus mykiss (rainbow trout): 110493487
Help
Entry
110493487 CDS
T07259
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110493487
03037 Cilium and associated proteins [BR:
omy03037
]
110493487
Transporters [BR:
omy02000
]
Other transporters
Pores ion channels [TC:
1
]
110493487
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110493487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
110493487
NCBI-ProteinID:
XP_021423463
LinkDB
All DBs
Position
17:22520900..22555351
Genome browser
AA seq
1018 aa
AA seq
DB search
MSHYNNTGGYNNPAYHDSDTLEIDRSPSRKSQSHHSNPHGNPYPRDDGAGGERGRSDLQQ
LPGGVQSSYNDAQERVPWGGWQEGSWRGRDSIPMGLLPPRSESPRWQQHDLNHSGYQIDQ
ATHYDTTPPVRLPSATSGHVSMRFRGSRKMSLFPVGEAALGNLGLSEDDIRNEMENEEQN
LVQELVAMSTRDRIKAIRDLPMSFDDKKHIRGQVLALKSFKKSRQLNCFADCSTTVSLAF
RRCGANMTLAKQTLELWRGTMKEVGGKFGTGVLSYFKFLKWLLMFNIFSFLVNFGFITIP
QLIYHPTPDIPAGVSFKGLEILTGAGYFSHTVMYYGGYSNKTQGTGGRSEYNMQLAYFFT
VAAYMVLCGAALIYSMASSFRKKYVLADSGLGGAWQLLCSWDFSVTNEKAVRQRKNNLRI
QLKESLSEKIQVALLPLTERLKHYGVFLGTWLLSTGMALGCGASVYFLCQYDTWRTRQSS
DKASGSLLEEAATLLLPFVVSLINLVVPLFYSLFKKIEHYSNPRMQVYAIIVRNVILKMS
ILGILCYYWMKDVANTFSCWESIVGQALYRLVIMDFLFIMLGSFFGEFLSNVIGTKCIQS
LGVPEFDVARNVLDLIYAQTLAWIGIYFSPLLPVIQIIKFFILFYLKKVSLTLNCQPPRR
AGRAAQMQTIFIAILFFPSFVGALSMVAYTVWILPPSDKCGPFRGLNTTFSAIQIWMDDL
NRVDAFQWTVWIYQHVIRSEIFYFLISLIILVFIYIFRQITQGRQLLIILLRQQIVNEGK
DKAFLLEKLQNLQKSKQNKQKKKKQVRKRQENESSTGMLQALIARQRLEQENGDSSSSFG
VPMPSGHSVSTTSSAMMQAMLARQYAEDQDVASYRGVPFPADQTPAPSSALIQAMQARQR
AESQNEDEFYRAPVQSQNPVNALPSAMIQVMQARQRVESEQEEDQFYRAPVHSEHPVSST
PSAMMQVMQARQRAEEEESEFYRAPASSQHPDASGTGSALIQAMLARQQVEEEYGDRY
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtcacactacaataacactggaggatataacaaccctgcctatcatgacagtgacacc
ctggagatagataggagtccttctaggaaatcccaatcccatcacagtaacccccatggt
aacccctaccccagggatgatggagccgggggtgagaggggcaggtctgatcttcagcag
ctcccaggaggggtccaatccagctacaacgatgcccaggagagagtgccctggggcggg
tggcaggaggggagctggaggggcagagacagcattcccatgggtctccttcctccccgg
tcggagagcccacgatggcagcagcatgacctcaatcacagcgggtaccagatcgaccag
gcaacgcattatgacacaacgcctcctgtacgacttccatctgcaacttcaggtcatgtt
tcgatgaggttcagggggtcgaggaagatgagtctattccctgtaggagaggctgctctg
ggcaatctgggcctttctgaggacgacatcaggaatgagatggaaaatgaggaacaaaac
ttggtccaagagctggttgctatgtcaacgagggacagaatcaaggccatccgagacctc
cctatgagctttgatgacaagaaacacatcaggggccaagtgttggcgttgaaatcattc
aaaaagtcccggcaactgaactgctttgcggactgctcaacgactgtctcactggcgttc
cgcaggtgcggtgctaacatgactttagccaagcagaccctggaactgtggcggggtacc
atgaaggaggtcgggggtaaatttggcacgggggtcctctcctacttcaagttcctaaaa
tggctgctgatgttcaacatcttctccttcctggtcaactttggtttcatcaccatcccc
cagctcatctatcaccccacgccagacatccccgctggggtcagcttcaaagggctagag
atactgaccggagcgggttatttcagccacacagtgatgtattatggcggctacagtaat
aaaacacaagggacagggggccggtctgagtacaacatgcagctggcctacttcttcacc
gtagcagcctacatggtgttgtgtggagccgccctcatctacagcatggccagctcgttc
aggaagaagtatgtccttgcagactcaggcttgggtggagcctggcagctcctgtgtagc
tgggacttcagtgtgactaacgagaaagccgtacgacagcgcaagaacaatctgcgcatc
caactcaaggagtccttatcagaaaagatccaggtggccctgctacctctgacagagagg
ctgaagcactatggggtcttcctgggtacctggctcctctccacgggcatggccttgggc
tgtggcgccagtgtctacttcctgtgtcaatatgacacatggcggacgaggcagtcatcg
gacaaagcttccggctctctcctggaggaggccgctactctcctcctcccctttgtggtg
tccctgatcaatctggtcgtccctctcttctactctctgttcaaaaagatagagcactac
tccaaccctcgcatgcaggtctatgccatcatagtcagaaatgtcattctcaagatgtcc
attctgggtattctctgctactactggatgaaggatgtggccaatacattttcatgctgg
gagtccatcgtaggacaagccttgtacagactggttattatggacttcctcttcataatg
ttaggatccttctttggagagttcttgagcaatgtcattgggactaaatgcatacagagc
ctgggagttccagagtttgacgttgccaggaatgtccttgacctgatctatgcacagacc
ctggcatggatcggaatctacttctctcccctcctcccagtgatacagataatcaagttc
ttcatcctcttctacctaaagaaggtcagcctgaccctgaactgccagccccccaggcga
gccggcagggcggctcagatgcaaaccatcttcatcgctatcctcttcttcccttccttc
gtgggggctctgtccatggtggcctacaccgtgtggattctgcccccctcagacaagtgt
gggcccttcaggggcctcaacaccaccttcagtgcaatacagatctggatggacgatttg
aacagggtggatgcgtttcagtggactgtctggatctaccagcacgtcatcaggagtgag
atattctacttcctgatctccctcatcatccttgtcttcatttacatcttcaggcagatc
actcagggacgccagctgcttatcattctactgagacagcagattgttaatgaagggaag
gacaaggcgttcttgttggagaagctacagaaccttcagaaatccaagcagaacaaacag
aaaaagaaaaaacaggtcaggaaaagacaggaaaatgaatcctccactggcatgctccag
gctctgattgcccgacagcggttggagcaagagaatggtgacagcagcagctctttcggt
gtgcctatgccttccggccactcagtctccacgacatcgagtgctatgatgcaggccatg
ctagccaggcaatacgcagaggaccaggatgtagccagttatcgcggggtgccatttcct
gcagaccaaacacctgcgccctccagtgcactgatacaggccatgcaagccaggcaaagg
gcggagtcacagaatgaggacgagttttaccgggcgccagttcagtcacagaacccagta
aacgcgttacccagtgcgatgatacaggtgatgcaagccaggcagagggtggagtcagag
caggaagaggaccagttttaccgggcgccagttcattcagaacacccagtgtcatcaaca
cccagtgcgatgatgcaggtcatgcaggccaggcagagagcagaggaggaggagagcgag
ttttaccgggcgcctgcttcttcacagcacccagatgcgtcaggcaccggtagtgctctg
atacaggccatgctagcccgacaacaggtagaggaggagtacggtgacagatactga
DBGET
integrated database retrieval system
