Oncorhynchus mykiss (rainbow trout): 110493518
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Entry
110493518 CDS
T07259
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omy03016
]
110493518
Enzymes [BR:
omy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
110493518
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110493518
Prokaryotic type
110493518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
NIL
Motif
Other DBs
NCBI-GeneID:
110493518
NCBI-ProteinID:
XP_021423522
Ensembl:
ENSOMYG00000023973
LinkDB
All DBs
Position
2:63226170..63238260
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AA seq
722 aa
AA seq
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MGGFQGVTISGVKYTWVGNLAYFIVRSLLNPCTSRSIRNSLWVALRYHTPHLRTPDIRAP
GVCQIHSFFFKVPISNLLIPMADAEPMLVPAPGGEKRACHALEEEEVDHSTKRPRVQKEE
KNGGPSHKLSQDEGEEPEGEETEPLDEDGEGEGLGSGEAFAEMMKHGLTELDVGILKFVS
EHQGFSGILKERYSDFVVHEINKEGKTVRLDDLSVPEEAEEAPVEQPESQVFTEEQNQQL
EQLQLFKNKEGNVSIEVADDTKEKRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGQ
KALAAPRKHSWPKSRGAFCHFVLYKENRDTMEAINVLSKFLRMRPNVFSYMGTKDKRAIT
VQEIAVLKITAERLSHLNKCLNNFKLGNFCYKKHPLKLGELQGNHFTVVIRNITGTEEQV
QQAMSSLRETGFINYYGMQRFGTTAVPTHQVGKAILQDNWKEVIDLILKPRPGAEKGYLV
KCREEWAQSQDPEAALKKLPVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSY
QSFMWNTMVSRRIEAFGLKAVEGDLVLRGGTAFVLSAAEAETHSIQDVVMPLPGFDVIYP
THHVGKGYREMLSADNLDIDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYEDPRVSLV
HTDVEKLEDQPPPVFNKEGKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTW
LN
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggtttcaaggagtgactatttccggagtcaaatacacgtgggtaggaaacctg
gcgtactttattgtgcgctctctactaaacccctgtacgagcaggtccatcaggaattct
ctttgggttgctttgaggtaccatacaccccatctacgaactcctgacatccgagcacca
ggtgtctgccagatacacagctttttctttaaggtccctatcagcaatctcttgatccct
atggctgatgcagagcccatgctggtccctgcccctgggggggagaagagagcatgccat
gctttggaggaggaggaggttgaccacagcaccaagagacccagagtccagaaggaggag
aagaacggagggccctctcacaagctgtcccaggatgagggagaagagccagagggggaa
gagacggagccattggacgaggatggagaaggggaagggttggggtcaggagaggccttt
gcagagatgatgaagcatggcctcacagagttggatgtggggattctgaagtttgtcagt
gaacaccaggggttctcaggcattctcaaggagaggtactctgactttgtggtgcacgag
atcaacaaagaaggcaagactgtgcggttggatgatctctctgttcctgaggaggctgag
gaggccccagtagagcagccagagtcccaggttttcacagaggagcagaatcagcagctg
gagcagctacaactcttcaagaacaaagagggtaatgtctctatagaggtagctgatgac
acaaaagagaagcggaccctggtccacaaggctgtgaagaccctgtaccctggactggag
accaagacagaggagcgggagggaaagaagttcatcgtggcctaccacgcagctggacag
aaagccctcgcagcccccaggaaacactcctggcctaagagccgcggggccttctgccac
ttcgtcctctacaaggagaacagagacaccatggaggccatcaacgtgctctccaagttc
ctcaggatgaggcccaatgtcttctcctacatggggaccaaggacaagagagccatcact
gtgcaggagattgcagttctcaagatcacagcagaaagactgtctcacctcaacaagtgc
ctcaataactttaaactaggaaacttctgctacaagaaacaccctctgaagctgggagaa
ctacagggcaatcacttcactgtggtcatcaggaacatcacagggacagaggagcaggtc
cagcaggccatgtcctcccttagagagacgggcttcatcaactactacggcatgcagcgc
tttggcaccaccgccgtgcccacacaccaagttggcaaggccatcttgcaagacaactgg
aaggaagtgatagatctgatcctgaagcctcgccctggagcggagaaaggttatctggtg
aagtgccgtgaagagtgggcccagtcccaggacccagaagcagctctaaagaagctgcct
gttaaacgctgtgtggagggacagctgctccgaggtctctccatgtatggcaagaagaac
atcatcactgccttcgccatgatccctcgtaacaaccggctgatgtacatccacagctac
cagagctttatgtggaacaccatggtcagcagacgcattgaggccttcggactgaaggct
gtggagggagacctcgtgctcaggggaggcactgcattcgtgctgtccgcagcagaggcc
gagacccactctatccaagacgtggtgatgcccctaccagggtttgacgtcatctacccc
actcaccacgtgggtaagggctacagggagatgctgagtgcagataacctggacattgac
aacatgagacacagggtgagggactactctctggccggggcctaccgacgcatcctcatc
aaacccagtgacgtcagctgggaggtgattaactatgaggaccctcgtgtctccctggtc
cacactgatgtggagaaactagaggaccaacctcccccagtcttcaacaaagaggggaag
tacagggctctgaggatggagttctccctgcctccctctacctacgccaccatggccatc
agagaggtgctcaagatggacactagcatcaagaaccagactcagctcaacaccacctgg
ctcaactaa
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