Oncorhynchus mykiss (rainbow trout): 110493539
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Entry
110493539 CDS
T07259
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110493539
Membrane trafficking [BR:
omy04131
]
Endocytosis
Others
Others
110493539
Endosome - Lysosome transport
110493539
Endosome - Golgi transport
110493539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
110493539
NCBI-ProteinID:
XP_021423551
Ensembl:
ENSOMYG00000038121
LinkDB
All DBs
Position
17:24473710..24694431
Genome browser
AA seq
1256 aa
AA seq
DB search
MDTWLGFCPGLHLTLCTWFLISAHTQLNAKAEITCALCQSPVQLHLKELQLDTGTHAADG
TRHAAKALEQVRLEYQLLGVTDQNTGVPSDTQQAGVLVDEPRSTDDGVTPKVALEDLTGS
SENEERYRGEYNIGVDDLGKVKDGAEDFALRRAKRSGPEPPEFRESLMTGGPGLEGEASD
ERRSPGPLLDGHRLGRSEFKWNRDEGRGTSRGDDPKLSSTTFALTGDSAHNHAVVYWSGQ
NSSVILILTKLYDFHLGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKRKI
MVLTDPEFESSVLISSDEGASYQKYRLSFYILSLLFHPTQEDWALAYSHDQKLYASLDFG
RKWQLVHEHVNRFYWSVTGLDKESDLVHMEAHTPNGRIQYVTCQALTCSEANRNYPFPGY
IDISSLVVQDDYMFIQVTTAGQASYYVSYQRDPFLKIKLPKYSLPKDLHIVSTDEHQVFA
AVQEWNQNDTYNLYLSDTRGILFTLAMENVKTTRGLGGNQMLDLYEVAGIKGMLIANRRL
DNQVKTYITYNKGRDWRLLQAPATDLAGNDIHCILPFCSLHLQLQTSENPYLSGSISTKA
SAPGIIVATGNIGSDLSYNNVGMFISSDAGNNWRQIFEEEHNVWFLDKGGALVAVKQPTV
PTRHLQISFDEGRQWTRHSFSLVPLFVDGMLVEAGTENQIMTFFGHFSHRSEWQLIKIDY
KSIFNRKCTEGDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGKDYAKVLSAESCICR
AHDFECDYGYERRREGNCLPAFWFNPAVVSRSCSQGQNYLNSTGYRKVVSNNCIKGVKDM
YTPRKQMCPNRAPKGLSLSTREGKLTADLHTNVTFLVHLDEGDSMRTNIQLDFGDGTAVS
YSNLSWIEEGIRHVYKTAGIFRVSALAENTLGFDTTTLYLHVTCPVEHVQLLAPFVAIKN
KEVNLTAVVWPIHSRTLTYFWWLGNSTEPVISLDGSISYTFTSEGMNTVTVQVSSANAIL
QDTKTIAVQEFFKSLLLSFSPNLDEYNPDVPEWRQDVGRVIKKALLQVSDFPEDQLLVEV
FPGVPTAAELFLLPHKNQSEGRKKSEEELEQISEILASALNQNLVEFELKPGARVIVYIT
QLTLGKERTPLVDSSPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWMNIYAEVNQEKE
QEMIGSVSQSDSTPKTTLSEFSTPKEVMEKEMDARVKRRIGNACESTREIPNCTSV
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggatacttggcttggcttctgcccaggcttgcacttaactctgtgtacctggtttctg
atctccgctcatacccagctaaatgccaaggcggagataacttgcgcattgtgccagtcg
ccggtccagctacacctgaaggaattacagctggataccggtacgcacgcggctgatggt
acgaggcatgcggccaaagctttggaacaggtccgactggagtaccagttactcggagtt
actgaccaaaatactggagtaccaagcgacacccaacaggcaggtgttctcgtggatgag
ccgagatccactgacgatggagttaccccaaaagtcgctctggaagatttaaccgggtct
agtgaaaacgaagaaaggtaccgtggtgaatataatattggggtggatgatttgggtaag
gtcaaggatggtgctgaggattttgcgttacggagagcgaagcgaagcggtcccgaaccc
cccgagtttagggagagccttatgaccggtggccccggtttagaaggagaggcatcggat
gagagaaggagtcctggtccgttactggacggacacagactgggccgatccgaattcaag
tggaacagggacgagggtcgagggacttccagaggagatgatcccaaactaagcagcact
actttcgccttgaccggggactcagcgcataaccacgcagtggtttactggtcggggcaa
aacagcagcgtgatcctgattctgaccaaactttatgactttcacctggggagtgttaca
gagagcaccttgtggagatcaacagactatggctccacctatgagagaatgaatgacaaa
gtgggatctaagacggtgctcagttacctgtatgtctgtccatccaacaagagaaagata
atggtgctgacagaccctgagtttgagagcagtgtgctcatcagctcggatgaaggagcg
agctatcagaaataccgcctcagcttctacattctaagccttctgttccatccgacacag
gaggattgggccctagcctacagccacgaccagaagttgtatgcctccctggactttggg
agaaaatggcagctggttcatgagcatgtgaacaggttctactggtctgtaacgggtcta
gacaaggagtcagatctggttcacatggaggcacacacccccaatggacgtatacagtat
gtaacatgccaggctctcacatgctcagaggccaacagaaactaccccttccctgggtac
atcgacatcagctcactggtggtccaagatgactatatgtttatccaggttactacagca
ggacaggccagctactatgtgtcctaccagagggatccattcctcaaaatcaaactgcca
aaatattctctgcctaaagacctccacattgtcagcacagacgagcaccaggtgttcgcg
gcagtacaggaatggaaccagaacgacacatacaacctgtacctctccgacacccggggc
atcctcttcaccctggccatggagaacgtcaagaccacccgtggcctggggggcaaccag
atgctggacctgtatgaggtagcaggtatcaaaggcatgctgatcgcaaacaggaggcta
gacaaccaggtgaagacctacatcacctacaacaagggtcgtgattggcggttactacag
gccccggcgacagacctggctggcaacgacatccactgtatactacccttctgttcgctc
catctccaactgcagacgtctgaaaacccctacctgtcaggcagcatatcaaccaaggcc
tcagcaccgggaatcatagtggccacagggaatattgggtctgatctgtcgtacaataac
gttggaatgttcatctcatctgatgctggtaacaactggagacagatattcgaggaggaa
cacaacgtctggtttctggataaaggaggggcccttgtcgctgtgaaacaaccaaccgtc
cccactaggcatttacagatcagttttgatgaggggcggcagtggaccagacacagcttc
tccttggtgcctctgtttgtggacgggatgctggtggaggccgggacagagaaccagatc
atgacgttttttggacatttcagccataggtctgagtggcagcttatcaagatagactac
aagtccatcttcaacaggaaatgtacagaaggagactatcagacgtggcaccttcacaac
aagggcgagccgtgtgtgatgggccagaaacagatctatatgaaacgcagaccaggaaac
tattgcatgctgggaaaagactacgccaaagtcctctctgctgagtcgtgtatctgtcgg
gcccacgactttgaatgtgattatggctatgaacggcgtagagaagggaactgtctacca
gcgttctggttcaacccagctgttgtatcaaggagctgcagccaaggacagaactacctc
aacagcacagggtaccgaaaagtggtgtccaacaactgcatcaagggagtcaaggacatg
tacacacccaggaagcagatgtgtcccaacagggctccaaaaggcctttctctctccacc
agagagggcaagcttactgccgacctgcacaccaacgtcaccttcctggtgcatctggat
gagggtgactcaatgagaaccaacatccaactggatttcggggatggcacggcagtctcc
tactccaacctgagctggatcgaagaggggatcaggcatgtttacaagacggctgggata
ttccgtgtctcagccttggcggaaaacaccctgggatttgatactaccacgttgtacctt
catgttacgtgtcctgtggaacatgtccagttgctggctccatttgtggccatcaagaac
aaggaagtaaacctaacagcagtggtctggcccatccactcaaggaccctcacctacttc
tggtggctggggaacagcactgagccggtgatcagcttagatgggagcatctcgtacacc
ttcaccagcgagggaatgaacactgttacggtccaagtgtcttcagccaacgcgatactg
caagacactaagacaatagcagtccaagagttcttcaaatctctgcttttatctttctcc
cctaatctggacgagtacaaccctgacgtccccgagtggagacaggatgtggggagagtc
attaagaaggctctgctccaagtgtcagactttccagaggatcagctattggttgaagtg
tttccaggtgtgccaacggccgctgagctcttcctgttaccacacaagaaccaatcagag
ggccggaaaaaaagcgaggaggagctagagcagatctctgagatacttgccagcgctctg
aaccagaatctggtggagtttgagctaaagccaggagcaagagtaatcgtttacatcacg
cagctaactttgggtaaggaaagaacaccattggtggattccagcccgagacacagcagt
tcagccatgctgatgctcctgtcagttgtattccttggtttagcagtgtttctcatctac
aaattcaagagaaaaatcccctggatgaacatatatgcggaggtgaaccaggagaaagag
caggagatgatcggttcggtcagccagagtgacagcacgcctaagaccaccctcagtgag
ttctctacgcccaaagaagtcatggagaaggagatggacgccagggttaaacggcgaatt
ggaaatgcctgcgagagcacaagggagattcctaactgtactagcgtgtaa
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