Oncorhynchus mykiss (rainbow trout): 110493541
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Entry
110493541 CDS
T07259
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110493541
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
Others
110493541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
110493541
NCBI-ProteinID:
XP_036805357
Ensembl:
ENSOMYG00000040607
LinkDB
All DBs
Position
17:complement(25506568..25656439)
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AA seq
1288 aa
AA seq
DB search
MERVVRLCPIWHNNVFWFMLLIIIYFFLAAKSELTCRSCQPGDKGRIKELLLKTDTREFA
TGYGEEVIGNGDGATASRSLNSASAETQQLDCAAGSDACIQGKYIYSRRKRNTDMLFRSK
NALLDGGMQYGGGKQRKFTPRGEYKVSNLKMNLHAGNTDVGKARADLIPGITHKHRVRRN
SPRANIGDDKVKSSGSPKRRETLPLSYSREGITSPAGRSRVTRSELRWSNEDRRAASSRQ
DELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGT
TYQKLNEKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRHSFYIL
SLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEPGLIHLE
TIISEGQALYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSAK
REVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSETGGVFYTLALENV
VSSMGHEGNVMIDLYEVAGIKGMFLANKKTDNVVKTYITYNRGRDWRLLQAPTADLRGNS
IRCELPYCSLHLHLHVSANPYTSGNIESKDSAPGIIVASGSIGAELTTSNVSMFITSDAG
NTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWMSFDEGRQWNKYSFTMSPLFVDGL
LGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNRGEPCIMGVK
RIYRKLKPIARCVMGKTYSVTMTSAPCDCTEADFECDYGYERRSDGKCTPAFWFLPSSMS
RSCTTGTTFINSTGYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGKLTATLG
TNVTFLVFLEEGDGARTSIMVDFGDGHALTYSNVSSIEDGVKHVYKAVGIYRVSATGENR
LGSESVVLYLHVTCQLEYIHLSAPFVAVKSKEVNLTAVLWPSQVGTVTYIWWFGNNTEPI
ITLEGSVACTFSREGVNTVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLDDHNPDV
AEWRLDVSRVIKNSMVKATGVSPDLLLVTVLPGLPTAAEFFLLPDKELTEGKPEKNSAHL
DQLSEILLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVLG
LAIFVVYKFKRKIPGLNVYAQMQNEKEQEMIPSPVSPTESTLVSPNTPMELVTSPELMDT
ELNTRPIGCIKPHAHVKFSTELPTYINI
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagagggttgtcagattatgccctatttggcacaataacgttttttggtttatgctt
ttgataatcatatatttctttctagccgctaaatcagagctaacttgcagatcatgtcag
ccgggagataaggggcgtattaaggaattactgcttaaaacggacacacgagaattcgca
acagggtacggagaggaagttattggaaatggagacggggcaactgcttcacggagttta
aattctgcaagtgccgaaactcaacagcttgattgcgcagctgggtcggatgcatgcatc
caggggaaatacatctactcaaggcgaaaacggaatactgacatgctgttccgttccaag
aacgcactactcgatggaggaatgcaatacggtggtggtaaacagagaaaattcaccccg
cgcggtgagtacaaagtttccaacctgaaaatgaaccttcatgcaggaaatacagatgtc
gggaaggctcgcgcagatttaattcccggcatcacacacaagcaccgagttcgtaggaac
agcccgagagctaatattggggacgataaagtgaagtcctccggctcacccaagagaagg
gagacgctgcctctgagttactctcgagagggcatcacctcaccggctgggcgcagcaga
gtgacacggtccgaattacgatggagcaacgaggacaggagagcggccagttcgaggcag
gacgaactcaaactcaccagttcaaccttcgctttgaccggagattccgctcacaaccaa
gccatggtgcactggtctgggcaaaacagcagtgtgattctcatgctgaccaagctgttt
gacttcaacctgaacagtgtcacggagagctcgttgtggaggtcaaccgactatggaacc
acttaccagaagctcaatgagaaagtgggggcgaaaacaatcctcagctacttgtacgtc
agtcccaacaacaagagaaagatcatgcttctgactgacccggaggtggaaagcagcctg
ctgatcagctccgatgagggagccacctatcagaagtaccgccacagcttctacatcctc
agccttctcttccaccccgagcaggaggactggatccttgcctacagccatgaccagaag
ctgtacagctcggtggagtttggaaggaggtggcaacttgtccatgagagggtggccccc
aatcgattctactggtcaaaaacgggtttagacaaagaaccgggcttaattcacctggaa
accatcatctctgaaggacaggcgttgtacgtcacctgcaagctgcagaactgcaccgag
gccaataagggcaagccgttccctggctacattgaccccaattcccttgtggtgcaagac
gagtatgtgtttgtccaggtgtcaactggtgggcgtccaatctactacgtgtcagccaag
cgggaagtcttcacacccatgaagctacccaaatacaccttgcctaaggatctgcatgtg
atcagtacagatgagaaccgggtggttgcggcggtgcaggagtggaaccagaacgacacc
tacaacctgtacgtgtcagagactggaggggtcttctacaccctggccctggagaacgta
gtcagcagcatggggcacgagggcaatgtcatgatagacctgtatgaggtggcgggaata
aaagggatgttcctcgccaacaagaagacggacaacgtggtgaagacttacatcacctac
aacagagggagagactggaggctcctgcaggctcccactgctgatctgaggggcaacagc
atccgctgtgaactaccatactgttccctacacctccacctgcatgtgtcggccaacccc
tacacgtcggggaatatcgagagcaaggactctgccccggggatcattgtggcctcaggc
tccatcggagcggagttgaccaccagcaacgtgagcatgttcatcacctcggacgccggc
aacacgtggagacagatctttgatgaggagtacagtgttctctacctggaccaaggaggg
gccctggtggctataagacacactccactccccatccgacacctatggatgagtttcgac
gaggggagacagtggaataaatacagtttcaccatgtctcctctgtttgtggacgggttg
ctaggggagccgggggaggagactctcatcatgacgatctttggccacgtcagtcaccgg
tccgagtggcagctagtcaagattgacttcaggtccatcttcaaccggagatgtacagag
ggggattaccagacatggcacctacacaaccggggcgagccgtgcatcatgggagtgaaa
agaatctacaggaagttgaagcccatagccaggtgcgttatgggtaagacatactcggtc
acgatgacctcggcgccctgcgactgcacagaggccgactttgagtgtgactatggctat
gagaggcggagtgacggcaagtgcacccccgccttttggttcctcccatcgtccatgtct
agaagctgtaccacagggactactttcatcaacagcactggctacaggaaggtggtgtcc
aataactgcacagcgggagtcatagcagagtacacggccaggaggcagcactgtcctacc
caggcccccaaaggcctgcacctcgtcaccagtgaaggaaagctgacagctacgctgggc
accaatgtcaccttcctggtgtttcttgaagagggcgacggagccaggacgagcatcatg
gtggacttcggggacggtcacgctctgacctactccaacgtgagctccatagaggatggg
gtcaagcacgtctacaaggctgtggggatctaccgtgtgtccgctacaggagagaacagg
ctggggtcggagagcgtggtgctgtacctccacgtcacatgtcagctggagtatatccat
ctctccgctccctttgtggcggtgaagagtaaggaagtcaacctcaccgctgtgctgtgg
ccgagccaagtgggaacagtcacctacatctggtggttcggaaataacactgagccgata
atcaccctggaagggagcgttgcgtgcacgttctcccgggaaggcgtcaacactgtcacc
gtgcaggtgtccgctgggaacgccatcctgcaggaccggaaaaccatcgctgtccacgaa
tatttcaggtcacatctactagccttctcatctaacctggatgaccacaaccccgatgtg
gccgaatggagactggacgtcagcagagtcatcaagaactccatggtcaaagccacaggg
gtgagcccggatctgctccttgtcaccgtcctaccagggttgcccacggctgcagagttt
ttcctcctgccagacaaagagttaacagagggcaagccagagaagaactcagctcattta
gaccagctctctgaaatcttgcttagcgccctcaaccaaaacctggtccagttcaccctt
cggcctggggtccaggtcacagtatacgctgcacatttgtcagcagcgcccctagtggac
acgagtgagaaccacagcggctcggccatgctgatgctgctgtcggttgtggttctgggt
ttggcgatatttgtcgtctacaaattcaaaaggaagatcccaggcctcaacgtctatgcg
cagatgcagaacgaaaaagaacaagaaatgatcccgagtccagtaagtccgacggaaagc
accctggtgtccccgaacactccgatggagctggtgacttctccggagcttatggacaca
gagttgaacacaaggcccatcggatgcatcaaacctcacgcacatgtcaagttctcaacg
gaactccccacgtacatcaacatttaa
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