Oncorhynchus mykiss (rainbow trout): 110493680
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Entry
110493680 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04144
Endocytosis
omy04340
Hedgehog signaling pathway
omy04350
TGF-beta signaling pathway
omy04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110493680
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110493680
04350 TGF-beta signaling pathway
110493680
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110493680
04137 Mitophagy - animal
110493680
09144 Cellular community - eukaryotes
04520 Adherens junction
110493680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110493680
04121 Ubiquitin system [BR:
omy04121
]
110493680
03029 Mitochondrial biogenesis [BR:
omy03029
]
110493680
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110493680
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110493680
Autophagy
Mitophagy
Other mitophagy associated proteins
110493680
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110493680
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110493680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
110493680
NCBI-ProteinID:
XP_021423759
Ensembl:
ENSOMYG00000010322
LinkDB
All DBs
Position
17:complement(30141371..30219768)
Genome browser
AA seq
796 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLSKKDFFLVNTILHFGSSSTGLPDPFAKVVVDGSGQC
HSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRL
KDTGYQRLDLNKLGPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERR
TASGRIQYLNHITRTTQWERPTRPASEYSSPSGRPLSCVVDENTPILTPNGAAIGVLPSS
GSDPRVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP
RVPRDLSNVNCEELGPLPSGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPNG
PGPNGSRVAMESQSQNTNLSSRQSNQLKEQQPPPQVPALSPAQLPEEAECLTVPKYKRDL
VQKLKILRQELSNQQPQAGHCRIEVCREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGL
DYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGM
AVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVE
HNAYGEIIQHELKPNGKTVSVSEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQH
LLKSFDEKELELIVCGLGKIDIADWKSNTRLKHCTTDSNVVKWFWKAVESYDEERRARLL
QFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDANTNNLPKAHTCFNRIDVPAYEHYDKLY
DKLLTAIEETCGFAVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtgaaactgcggttgacagtgctgtgt
gcgaagaacttgtcaaagaaagacttcttccttgtgaatacaatcctccattttggctcc
tcctccacagggctgcctgacccctttgccaaagtggtggtggacggctcggggcaatgc
cactccacggacaccgtgaggaacacgctggaccccaagtggaaccaacattatgacctg
tacattgggaagtctgactccatcaccatcagtgtgtggaaccacaagaagattcacaag
aagcagggggccggcttcttgggctgtgtacgccttctctccaacgccatcaaccgcctc
aaagacaccggctatcagagactggacctgaacaagctgggccccaatgacaacgacaca
gtgagaggccagatagttgtgagtctacagtccagagaccgtatcggaacaggaggcccc
gtggtggactgcagccgtctgtttgataatgatttacctgatggctgggaggagcggaga
acagcctctggtcggatccagtaccttaaccacatcacacgcaccacgcaatgggagagg
cccacccggccggcgtctgagtactccagcccctccgggcggcccctcagctgcgtggtg
gatgagaacacgccgatcctgacacccaacggggcagccatcggtgtgctgcctagcagt
ggcagtgacccgcgggtccaggagagacgcgtccgctcccagagacacaggaactacatg
agcaggacccacctccacaccccgccggacctgccagagggatacgagcaaagaaccacg
cagcagggccaggtgtacttcctccacacccagacgggcgtcagcacatggcacgaccct
cgagtgcccagggatctgagcaacgtcaactgtgaggagctgggtcctctgccgtcgggc
tgggagatccgcaacacggccacgggacgcgtctactttgtggaccacaacaaccgaacc
acgcagttcaccgacccgcgcctctccgccaacctccacctggtcctgaatccaaacggc
cctggtccaaacggttcccgcgtggccatggagagccagagccagaacactaacctcagt
agtcgtcagtcgaaccagttgaaggagcagcagcccccaccgcaggtcccggcgttgtcc
ccggcccagctccccgaggaggccgagtgcctcaccgtgcccaagtacaagagggacctg
gtccagaagctcaagatcctccgacaggagctgtccaatcagcagccccaggcaggacac
tgtcgcatcgaggtctgccgtgaggagatctttgaggagtcgtaccgccaggtgatgaag
atgcgtcccaaggacctgtggaagagactgatggtcaagttcagaggagaggagggcctg
gactacggaggagtggccagggagtggctgtacctgctgtcccatgagatgttgaacccc
tactacggcctgttccagtactccagagacgacatctacaccctgcagatcaacccagac
agcgccgtcaacccggagcacctgtcctacttccactttgtgggccgtatcatgggcatg
gctgtgttccacggccactatatagacgggggcttcaccctgcccttctacaaacagctg
ctggggaaacccatcaccctggacgacatggagtcagtggacccggacctccacaacagc
ctggtctggatcctggacaatgacatcacgggggtgctggaccatacgttctgtgtggag
cacaatgcctacggagagatcatccagcacgaactgaagcccaatggcaagactgtctct
gtctccgaggacaccaagaaggagtatgtcaggctgtatgtgaactggaggttcctccac
ggcatcgaggctcagttcctggccctgcagaagggcttcaacgaggtcatcccacagcac
ctgctcaagtcctttgacgagaaggaactagagttgatagtgtgtggcctggggaagatc
gacatagcagactggaagagcaacacgcgcctgaagcactgcaccacggacagcaacgtg
gtcaagtggttctggaaggccgtggagtcctacgacgaggagaggagggccagactgctg
cagtttgttaccgggtcatctagagtcccactgcagggattcaaggctttacaaggtgcc
gcggggcccaggctgttcaccatccaccagatcgatgccaacaccaacaatctacccaaa
gcccacacctgctttaaccggattgacgttcccgcctacgagcactatgacaagctgtac
gacaagctgctgacagccatcgaggagacatgtggctttgcggtggaatga
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