KEGG   Oncorhynchus mykiss (rainbow trout): 110493686
Entry
110493686         CDS       T07259                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    110493686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110493686
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110493686
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    110493686
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-B_box zf-C3HC4 zf-C3HC4_4 zf-RING_5 ANCHR-like_BBOX CCDC113_CCDC96_CC U-box
Other DBs
NCBI-GeneID: 110493686
NCBI-ProteinID: XP_021423771
Ensembl: ENSOMYG00000014444
UniProt: A0A8C7Q131
LinkDB
Position
17:30364642..30375870
AA seq 671 aa
MANEMFSLMSLEDELSCSICLCAFDCPVTIPCGHNFCQACLLETWKDNYSCPQCRTHFTT
KPELKKNTVLSTVVETFKMKSNKSDLPNEMGDLIKWDAVKLEPKEVVILCDTCMEAKAFK
TCLTCMASFCLEHVRPHHENPVFGAHQLNEPLGDLRDRICPDHHKLMEFYCVQHGRCICG
VCLQQVHKGCTFSNPDEQRALQESDLRGKLSLLDGKIDKNQTVISQMSDQQSKLKDSAAS
RKRALEDDYRQIRELLDRDEREALNTVDREQESGQTKLQNLIKKFNQNIVKLSAAKDGVN
SLLSQTQTVAFLQASVDMPAVVAFDPYTPKVNLDSKAVAAWHAYSAVLREHLTHVLKQPV
ETRLQILKPAERFAPLLPNFYEMGGMPPQGHPRVPRSHSPGAPLRANQKKPPQDSNRERK
SDKKRDHKEWKEHKADKNSQKPPNAPRESATPVPHTPRDHPRGQSAEPRNREDPGQASVP
PSITSAAKRNDLLRYGTVLTLDPKTAHKRISLTENMTMASVSDEPTHYPDGPARFSVCSQ
VLTSKGFSRGRHYWEVKMSSNNFTGIGLAYNSIDRKGPASRLGRNAQSWCVEWFNVKLSA
WHASSETVLQNPNPIRVGVLLDCEEGTATFYNVQDRAYPFHTFVFQFAEAVYPAFWLFSS
GSSVSLCKLQS
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggccaacgaaatgttttccctcatgagtctcgaagacgaactgagctgtagcatctgc
ctctgtgctttcgactgtccggtgacaattccatgtggacacaacttttgccaagcgtgt
ctcctagaaacatggaaagacaactacagctgtccacaatgccgtacccacttcaccacc
aaaccagagctgaagaagaacaccgttctcagcactgttgtggaaacgttcaaaatgaag
tcgaataaaagcgacctccccaatgagatgggcgacttaatcaagtgggatgcggtcaag
ttggagcccaaagaggtggttatcttgtgcgacacctgtatggaagccaaagcattcaag
acctgcctcacctgtatggcgtcattctgccttgagcacgtgaggcctcatcatgagaat
ccagtgtttggcgcgcatcagctgaacgagcctctgggtgacctgcgcgaccgtatctgc
cccgaccaccacaagctgatggagttctactgtgtccaacatggccgctgtatctgtggt
gtctgtctgcagcaggtgcataaaggctgtaccttctccaaccctgatgaacaacgggca
ctgcaagagtctgatttgaggggcaagttgagtctgctggatggaaagattgacaagaac
cagacggtcatctctcagatgagtgaccagcagagcaagttgaaggactctgcagccagc
aggaagagagcgctagaggatgactaccgccaaatccgggagctgctggaccgtgacgag
cgtgaggctctgaacactgtggaccgcgagcaggagagcggtcagaccaaactccagaac
ctcataaagaagttcaaccagaacattgtgaagcttagcgcagcaaaagatggcgtcaac
agcctgctcagtcagactcagaccgtggctttcctacaggcctcagttgacatgccggca
gtggtggcctttgacccctataccccaaaggtgaacctggactctaaggccgtggcagcc
tggcatgcctactctgcagtcctgagggagcatctcacacatgtactgaaacagcctgta
gagaccagactgcagatactcaaaccagctgagaggtttgctcctctgctgccaaacttc
tatgaaatgggaggcatgccaccacaaggtcatccgagagtgcctagatcccacagccca
ggagctcccctcagggcaaaccagaagaagcctccacaagattcaaaccgagagagaaag
tcggacaagaaacgagatcacaaggaatggaaagaacataaggctgacaaaaattcccaa
aagccacctaatgctcccagagagtccgccactcctgttccacacacaccaagggaccac
cccagaggacaatcagcagaacccaggaacagggaggacccaggacaagcaagtgttccc
ccaagtatcacgtctgcagcaaaacgaaatgaccttctacgatatggcaccgttctcacc
cttgaccccaaaacggcccacaagcgcatctccctgacagagaacatgaccatggcctct
gtgtcagacgagcccacccattaccccgatggccccgcccgcttctctgtctgcagccag
gtgctcacttccaagggcttctcccgtggccgtcactactgggaggttaagatgagcagc
aacaacttcaccggcatcggcctggcctacaacagcattgaccggaagggtccggctagc
cggctggggcgtaacgcccagtcctggtgcgtggagtggttcaacgtcaagctgtcggcc
tggcacgccagcagtgagactgtactgcagaacccgaatccgatccgcgtcggcgtgctt
ttggattgtgaggagggaacggccactttctataacgttcaggaccgggcataccctttc
catacgtttgtgttccagttcgcggaggcagtgtacccggcattctggctcttctccagc
ggctcgtctgttagcctgtgcaagctgcagtcttaa

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