Oncorhynchus mykiss (rainbow trout): 110493686
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Entry
110493686 CDS
T07259
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
110493686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110493686
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110493686
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110493686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-C3HC4
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
CCDC113_CCDC96_CC
U-box
Motif
Other DBs
NCBI-GeneID:
110493686
NCBI-ProteinID:
XP_021423771
Ensembl:
ENSOMYG00000014444
UniProt:
A0A8C7Q131
LinkDB
All DBs
Position
17:30364642..30375870
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AA seq
671 aa
AA seq
DB search
MANEMFSLMSLEDELSCSICLCAFDCPVTIPCGHNFCQACLLETWKDNYSCPQCRTHFTT
KPELKKNTVLSTVVETFKMKSNKSDLPNEMGDLIKWDAVKLEPKEVVILCDTCMEAKAFK
TCLTCMASFCLEHVRPHHENPVFGAHQLNEPLGDLRDRICPDHHKLMEFYCVQHGRCICG
VCLQQVHKGCTFSNPDEQRALQESDLRGKLSLLDGKIDKNQTVISQMSDQQSKLKDSAAS
RKRALEDDYRQIRELLDRDEREALNTVDREQESGQTKLQNLIKKFNQNIVKLSAAKDGVN
SLLSQTQTVAFLQASVDMPAVVAFDPYTPKVNLDSKAVAAWHAYSAVLREHLTHVLKQPV
ETRLQILKPAERFAPLLPNFYEMGGMPPQGHPRVPRSHSPGAPLRANQKKPPQDSNRERK
SDKKRDHKEWKEHKADKNSQKPPNAPRESATPVPHTPRDHPRGQSAEPRNREDPGQASVP
PSITSAAKRNDLLRYGTVLTLDPKTAHKRISLTENMTMASVSDEPTHYPDGPARFSVCSQ
VLTSKGFSRGRHYWEVKMSSNNFTGIGLAYNSIDRKGPASRLGRNAQSWCVEWFNVKLSA
WHASSETVLQNPNPIRVGVLLDCEEGTATFYNVQDRAYPFHTFVFQFAEAVYPAFWLFSS
GSSVSLCKLQS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgaaatgttttccctcatgagtctcgaagacgaactgagctgtagcatctgc
ctctgtgctttcgactgtccggtgacaattccatgtggacacaacttttgccaagcgtgt
ctcctagaaacatggaaagacaactacagctgtccacaatgccgtacccacttcaccacc
aaaccagagctgaagaagaacaccgttctcagcactgttgtggaaacgttcaaaatgaag
tcgaataaaagcgacctccccaatgagatgggcgacttaatcaagtgggatgcggtcaag
ttggagcccaaagaggtggttatcttgtgcgacacctgtatggaagccaaagcattcaag
acctgcctcacctgtatggcgtcattctgccttgagcacgtgaggcctcatcatgagaat
ccagtgtttggcgcgcatcagctgaacgagcctctgggtgacctgcgcgaccgtatctgc
cccgaccaccacaagctgatggagttctactgtgtccaacatggccgctgtatctgtggt
gtctgtctgcagcaggtgcataaaggctgtaccttctccaaccctgatgaacaacgggca
ctgcaagagtctgatttgaggggcaagttgagtctgctggatggaaagattgacaagaac
cagacggtcatctctcagatgagtgaccagcagagcaagttgaaggactctgcagccagc
aggaagagagcgctagaggatgactaccgccaaatccgggagctgctggaccgtgacgag
cgtgaggctctgaacactgtggaccgcgagcaggagagcggtcagaccaaactccagaac
ctcataaagaagttcaaccagaacattgtgaagcttagcgcagcaaaagatggcgtcaac
agcctgctcagtcagactcagaccgtggctttcctacaggcctcagttgacatgccggca
gtggtggcctttgacccctataccccaaaggtgaacctggactctaaggccgtggcagcc
tggcatgcctactctgcagtcctgagggagcatctcacacatgtactgaaacagcctgta
gagaccagactgcagatactcaaaccagctgagaggtttgctcctctgctgccaaacttc
tatgaaatgggaggcatgccaccacaaggtcatccgagagtgcctagatcccacagccca
ggagctcccctcagggcaaaccagaagaagcctccacaagattcaaaccgagagagaaag
tcggacaagaaacgagatcacaaggaatggaaagaacataaggctgacaaaaattcccaa
aagccacctaatgctcccagagagtccgccactcctgttccacacacaccaagggaccac
cccagaggacaatcagcagaacccaggaacagggaggacccaggacaagcaagtgttccc
ccaagtatcacgtctgcagcaaaacgaaatgaccttctacgatatggcaccgttctcacc
cttgaccccaaaacggcccacaagcgcatctccctgacagagaacatgaccatggcctct
gtgtcagacgagcccacccattaccccgatggccccgcccgcttctctgtctgcagccag
gtgctcacttccaagggcttctcccgtggccgtcactactgggaggttaagatgagcagc
aacaacttcaccggcatcggcctggcctacaacagcattgaccggaagggtccggctagc
cggctggggcgtaacgcccagtcctggtgcgtggagtggttcaacgtcaagctgtcggcc
tggcacgccagcagtgagactgtactgcagaacccgaatccgatccgcgtcggcgtgctt
ttggattgtgaggagggaacggccactttctataacgttcaggaccgggcataccctttc
catacgtttgtgttccagttcgcggaggcagtgtacccggcattctggctcttctccagc
ggctcgtctgttagcctgtgcaagctgcagtcttaa
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