Oncorhynchus mykiss (rainbow trout): 110493725
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Entry
110493725 CDS
T07259
Name
(RefSeq) homeobox protein OTX1 B isoform X1
KO
K09326
homeobox protein OTX1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110493725
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110493725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
CPSF73-100_C
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110493725
NCBI-ProteinID:
XP_021423820
Ensembl:
ENSOMYG00000019650
LinkDB
All DBs
Position
17:31792455..31836455
Genome browser
AA seq
363 aa
AA seq
DB search
MMSYLKQAPYGMNGMGLSGTAMDLLHPSVGYPDRNGFEEFPLTGFYSISAHPRKQRRERT
TFTRTQLDILESLFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQSGNNA
KVRPAKKKSSPTRESTGSESSGQFTPPAVSSTGSSSSSSASSGGSHPSGHGGQGLSSTST
SVTAPVSSIWSPAPISPAPAPPPVPDPAPPISASCMQRSVSGTGGTSSYPVSYSQTAASY
GQGYPAPASTGSYFGGVECSSYLAPMHSHHHPHHPHQLSPMTGSSMSGHPHHHIGQTSGH
HHHHHPHHHQAYSGAGLAFNSSDCLDYKEQTAAAAASSWKLNFNTTDCLDYKDQASSWRF
QVL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtacggcatgaacggaatggggctcagcggtacg
gccatggacctactgcacccatcagtggggtatccagatcgaaatggcttcgaagagttt
ccattgacaggtttctattccatttcagcgcatccgaggaaacagcggagagagaggaca
acttttactcgcactcagctggacattctggagtcccttttcggcaagacgcgctaccca
gacattttcatgcgggaagaagtcgcactgaaaatcaatttgcctgagtctagagtccaa
gtatggttcaagaacaggagagccaagtgccgtcagcaggcccagagtggaaacaatgct
aaagtccggcctgccaagaagaagtcctctccaaccagggagagcacaggctcagagagc
agtggtcagttcacccctccggcagtgtccagcaccggctcctcttcctcttcctctgcc
tcgtccggtggctctcatccctccggccatggaggccaaggcctgagcagcacttctacc
tccgtcactgccccagtgtcctccatctggagccctgctcccatctccccggcccccgca
ccaccccctgtccccgaccccgctcccccaatcagtgcctcctgcatgcagaggtctgtg
tcaggtactggaggcacgtcctcctacccggtgtcctacagccagacagcggcgtcctat
gggcagggctaccccgccccggcgtcaacgggctcctacttcggaggggtggaatgcagc
tcgtacctggcccccatgcactctcaccaccacccccaccatccgcaccagctcagcccc
atgacgggctcctccatgtctggccacccgcaccaccatatagggcagacctcagggcac
caccaccatcaccacccccaccaccaccaggcctacagcggggccggcctggccttcaac
tcctcagactgtctggattacaaagaacaaacggccgcggccgcagcctcttcatggaag
ctcaacttcaacaccaccgactgcttggactacaaagaccaggcctcctcttggcggttc
caagtcttgtga
DBGET
integrated database retrieval system
