KEGG   Oncorhynchus mykiss (rainbow trout): 110493730
Entry
110493730         CDS       T07259                                 
Name
(RefSeq) ras-related protein ORAB-1 isoform X2
  KO
K07874  Ras-related protein Rab-1A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110493730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110493730
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110493730
   04031 GTP-binding proteins [BR:omy04031]
    110493730
Membrane trafficking [BR:omy04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    110493730
 Autophagy
  Other autophagy associated proteins
    110493730
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110493730
  Exosomal proteins of other body fluids (saliva and urine)
   110493730
  Exosomal proteins of colorectal cancer cells
   110493730
GTP-binding proteins [BR:omy04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    110493730
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N AAA AAA_7 ABC_tran PduV-EutP AAA_16 LANC_like Septin AAA_29 AAA_22 AAA_5 CRAL_TRIO_2 Dioxygenase_N TniB
Other DBs
NCBI-GeneID: 110493730
NCBI-ProteinID: XP_021423832
Ensembl: ENSOMYG00000021355
LinkDB
Position
17:complement(32008627..32013664)
AA seq 202 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFVDNLGIPFLEASAKSATNVEQAFMTMAAEIKKRMGPGATAG
GSEKSNVKIQSTPVKTSSGGCC
NT seq 609 nt   +upstreamnt  +downstreamnt
atgaatcccgaatatgattatttattcaagctgcttctgattggcgattctggcgttgga
aagtcttgcctcctcctccgatttgcagatgacacatacacagagagctatattagtact
attggagtggacttcaaaattaggaccatagagttagatgggaagaccatcaaacttcag
atttgggacacagctggacaggaacggttccggacaattacatccagttactacagagga
gcgcatggcattattgtagtgtacgatgtcacagaccaggaatccttcaataacgtgaaa
cagtggctccaggagattgaccgttacgccagtgaaaacgtgaacaagctgttagtaggc
aacaaatgtgacctgacgacaaagaaagtggtggactacacgacggccaaggaatttgtt
gacaatttagggatccccttcttggaagctagtgccaagagcgccaccaacgtggagcag
gccttcatgaccatggcagctgagatcaagaagagaatgggccctggggccacagccggc
ggctcggagaagtccaacgtcaagatccagagcacgccagtcaagacttcctctggaggt
tgctgctga

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