KEGG   Oncorhynchus mykiss (rainbow trout): 110493754
Entry
110493754         CDS       T07259                                 
Symbol
map1lc3c
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3C
  KO
K10435  microtubule-associated protein 1 light chain
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137  Mitophagy - animal
omy04140  Autophagy - animal
omy04216  Ferroptosis
omy04371  Apelin signaling pathway
omy04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    110493754 (map1lc3c)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110493754 (map1lc3c)
   04137 Mitophagy - animal
    110493754 (map1lc3c)
  09143 Cell growth and death
   04216 Ferroptosis
    110493754 (map1lc3c)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    110493754 (map1lc3c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110493754 (map1lc3c)
   03029 Mitochondrial biogenesis [BR:omy03029]
    110493754 (map1lc3c)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omy04812]
    110493754 (map1lc3c)
Membrane trafficking [BR:omy04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    110493754 (map1lc3c)
Mitochondrial biogenesis [BR:omy03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Other mitophagy factors
    110493754 (map1lc3c)
Cytoskeleton proteins [BR:omy04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     110493754 (map1lc3c)
SSDB
Motif
Pfam: ATG8 APG12 DUF4474
Other DBs
NCBI-GeneID: 110493754
NCBI-ProteinID: XP_021423883
Ensembl: ENSOMYG00000021920
UniProt: A0A060Y8J1
LinkDB
Position
17:complement(32844129..32845504)
AA seq 143 aa
MMPPFEKPQHPKSFKQRKSFATRKQEVAGIRTKFPTKIPVIIERYQREKYLPPLDKTKFL
VPQELSMTQFVTIIRNRMSLMQSQAFYLLINNSGLASMSLTMAQVYKDHKDDDGFLYMTY
ASQEMFGYCVEIHEESVPIAGNV
NT seq 432 nt   +upstreamnt  +downstreamnt
atgatgccgccatttgagaaaccacagcaccccaagtccttcaagcagagaaaaagcttt
gccacgagaaaacaggaggtcgcggggatccgaacgaagtttccaactaaaatcccggtt
ataattgaacggtatcaacgggagaagtacttgccgcctcttgataaaacgaaattcctg
gtcccacaagaactttccatgactcagtttgttaccattataagaaatcgtatgtctctg
atgcagagtcaagcattctacctgctcatcaataatagcggcctggccagcatgtctctt
accatggcgcaagtctacaaggaccacaaagatgacgatggatttctctacatgacatat
gcttctcaagaaatgtttggttattgtgttgaaatccacgaagagtcagtgccaattgct
gggaatgtttga

DBGET integrated database retrieval system