Oncorhynchus mykiss (rainbow trout): 110493757
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Entry
110493757 CDS
T07259
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110493757 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110493757 (spast)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
110493757 (spast)
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
110493757 (spast)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
110493757 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_5
TIP49
Vps4_C
Mg_chelatase
IstB_IS21
AAA_16
AAA_14
DUF815
AAA_24
nSTAND3
RNA_helicase
NPHP3_N
MIT
AAA_2
Motif
Other DBs
NCBI-GeneID:
110493757
NCBI-ProteinID:
XP_021423889
Ensembl:
ENSOMYG00000024497
LinkDB
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Position
17:complement(33008284..33035974)
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AA seq
596 aa
AA seq
DB search
MSSPGGRGSRKKRGPAGSPPDGGATCDQVSLHKRNLYYFSYPLLALFAVLRVLVLHFGEL
FAWLCERMSRAMAARPKQRAADEHANKVCEQDIGEQIRNHHKQAFEYISVALRIDEDDKV
HKEQAVQWYKRGIAELERGIAIEVAENGEKYERDKRLQAKMITNLIMAKDRLELLEKLRS
GPAQRDIYAESSNQSYHNGYLHSVSGAVPKKRDSLTTHSSHSLPRPKHTPKKTLPTGHGG
LQRSPSFIGPSSSHTQHRLVPQSNRNKSKTGNRQNCKPTTTPTSMSPLKKRDMKNLKNVD
SKLANLILSEIIDSGSSVRFEDVAGQELAKQALQEIVILPALRPELFTGLRAPARGLLLF
GPPGNGKTMLAKAVAMESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID
EIDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFA
KRVYVALPTEDTRLKLVKNLLGKHGNPLTQKELSQLARMTEGYSGSDLTSLAKDASLGPI
RELRPEQVRNMAANEVRNIRFSDFVESLKKIKKSVGPQTLDLYVRWNKDYGDTTGA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgggaggaagaggcagcagaaagaagcgaggccctgcagggtccccgccc
gacggaggggccacctgcgaccaggtgtccctacataaacgaaatttgtattacttctca
tacccactgctggcgttgtttgcagtgctccgtgtcctcgtattgcattttggcgaactc
ttcgcctggctgtgcgagcggatgtctcgtgctatggctgcgagacccaaacaacgggca
gcagacgagcatgcgaacaaggtgtgcgagcaggacatcggcgagcagatccgaaaccac
cacaaacaagcattcgagtacatctcagtggctctgagaattgacgaggatgacaaagtg
cacaaggaacaggcagtccagtggtacaaacgcggaatcgcagagctcgagaggggcatc
gcgatcgaggtagctgaaaacggcgagaaatatgaacgtgataaacgtctacaggccaag
atgatcaccaatctgatcatggcaaaggatcgcctggagcttttagaaaagctgcgttca
gggccagctcagagagacatctatgcagagagctcaaaccagtcataccataacggttat
ctacactcagtaagtggagccgtacccaaaaagagggactccctgactactcactccagt
cactccctcccacgaccaaagcatacgccaaaaaaaaccttgccgacaggccacgggggc
ctccagcgctcccccagcttcattgggccctccagcagtcacacacagcacagactggtc
ccccagtccaacagaaacaagagtaaaacgggcaaccggcaaaactgtaaacccaccacc
actcccacatccatgtccccactgaagaagagggatatgaagaacttgaagaatgtggac
agcaagcttgccaacctcatcctcagcgagatcatagacagtggctcatctgtgaggttt
gaggacgttgctggccaggagctggctaagcaggccctacaggaaatagtcatcctgcct
gcactaagaccagagttgtttacaggcttgagggctccagcacgaggccttctgctcttc
ggtcctcctggcaacggaaagacgatgctggctaaagcagtggccatggagtccaacgcc
acattcttcaacataagtgcagccagcttgacctcgaaatatgtgggggagggagagaag
ctggtgcgagctctgtttgccgtcgccagagaactgcaaccctcgatcatcttcatagat
gagatcgacagtctactctgtgaaaggagagagggagagcatgatgccagcagacgactg
aagacagagttcttgattgaatttgacggggtgcaatctggtggggatgaacgggtgttg
gtgatgggagccaccaacaggcctcaggagctggacgaggctgttcttaggcgatttgca
aaacgggtgtacgtggctttaccaacagaagacacccggctaaaactggtcaagaacctt
ttagggaagcacgggaatcctctcacacagaaagaactgtcccagcttgccagaatgaca
gaaggctactctggcagtgacctgacctcgctggccaaagatgcgtccctcggtcccatc
cgagagttgcgtccagaacaagtcaggaacatggccgcaaacgaggtgaggaatatcagg
ttctctgattttgtggagtcactgaagaagatcaaaaagagtgtcggaccacagacgctg
gacctgtatgtgcgctggaacaaggactatggggacaccacgggtgcatga
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