Oncorhynchus mykiss (rainbow trout): 110493794
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Entry
110493794 CDS
T07259
Name
(RefSeq) serine/arginine-rich splicing factor 7 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110493794
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110493794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110493794
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110493794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
zf-CCHC_3
SET_assoc
Motif
Other DBs
NCBI-GeneID:
110493794
NCBI-ProteinID:
XP_021423954
Ensembl:
ENSOMYG00000041990
LinkDB
All DBs
Position
17:34787290..34802322
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AA seq
238 aa
AA seq
DB search
MSRHGRNGGDSKIYVGNLGTGAGKGELERAFGYYGPLRTVWIARNPPGFAFVEFEDTRDA
EDAVRGLDGKLISGSRVRVELSTGMPRRSRYERAPTNRPFDSNDKCYECGERGHYAYDCH
RYGRRRRTRSRSHSRSGGRRYSRSRSRGRGRRSRSFSPRRSRSPRRSRALTPKRSRSRSK
SRSRSRSHSHAKTRSGSVGRSKSGSPTRSCSKSKASPQKLSHSTSRSPRRSDSSERDN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacacggtcgaaacggaggagactctaagatttatgtcggtaacctgggcact
ggtgcagggaaaggagagctagagcgggcgttcgggtattacggacctttaagaaccgtg
tggattgctaggaaccccccgggctttgcctttgtggagtttgaagacacccgggatgca
gaagatgcggtccgaggccttgacggcaagttgatttctggatctcgagttcgagttgaa
ttatctacaggaatgccgcggcgatctcggtacgagcgtgcgcccaccaaccggcccttt
gactccaacgacaagtgctatgagtgtggtgagcgggggcactatgcctacgactgccac
cgctacggtcgacgcaggaggaccaggtcccggtctcactccaggtccggtgggaggagg
tactctcgctctcgcagccggggccgtggcaggagatcaagatccttctctccacgccgc
tctcgttctcctagaagatctagagcccttacccccaagagatcaagatctcgatcaaag
tccagatcaaggtctaggtcacattctcatgcaaagaccaggtctggttctgtgggcaga
tccaagtctggttcccccacgaggagctgttcaaaatctaaagcttcacctcaaaaacta
agccactctacctcgaggagtcctcgtcgaagtgacagctcggagagggacaactga
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