Oncorhynchus mykiss (rainbow trout): 110493798
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Entry
110493798 CDS
T07259
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110493798
09122 Translation
03013 Nucleocytoplasmic transport
110493798
03015 mRNA surveillance pathway
110493798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110493798
03041 Spliceosome [BR:
omy03041
]
110493798
03009 Ribosome biogenesis [BR:
omy03009
]
110493798
03012 Translation factors [BR:
omy03012
]
110493798
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110493798
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110493798
mRNA cycle factors
Stress granule specific factors
110493798
Spliceosome [BR:
omy03041
]
Complex C
Other components
EJC/TREX
110493798
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
90S particles
Helicases
110493798
Translation factors [BR:
omy03012
]
Eukaryotic type
Initiation factors
eIF-4
110493798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
110493798
NCBI-ProteinID:
XP_021423963
Ensembl:
ENSOMYG00000043731
UniProt:
A0A8C7UQM3
LinkDB
All DBs
Position
17:complement(34962764..34970771)
Genome browser
AA seq
406 aa
AA seq
DB search
MEVATVPRTRRLLKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagccaccgtaccacgcacgaggcgtctattgaaggaggaagacatgaccaag
atcgagtttgagaccagcgaggaggtcgatgttacgcctaccttcgacacaatgggccta
agagaggatctcctccgtgggatctacgcatacggtttcgagaagccttccgcaatccaa
caaagagcaattaaacagatcatcaagggtagagatgtcattgcacagtctcagtcagga
acaggaaagactgccacgttttgcgtatcagtgctgcagtgtcttgacattcaggtgcgt
gaaacccaagcactgatcctggctcccaccagagagttggctggacagatacagaaggtg
ctcctggccctcggtgactacatgaacgtccagtgtcattcctgcatcggcgggacaaac
gtgggtgaggacatccgcaaactggactatggccagcacgtagtagcagggacccctggg
agagtgtttgatatgatccgcaggaggagtttgaggacgcgtgccatcaagatgctggtg
ctggacgaagcagacgaaatgctcaacaagggtttcaaagagcagatctacgacgtgtac
cggtacttgccccccgccacccaggtgtgtctgatcagcgccacgctgccccacgagatc
ctggagatgaccaacaagttcatgaccgaccccatccgcatcctggtcaaacgtgatgag
ttgactctggagggcatcaagcagttcttcgtggcagtagagagggaggagtggaagttt
gacaccctgtgtgacctgtatgacaccctcaccatcacgcaggctgtcatcttctgcaac
accaagcggaaggttgactggctgactgagaagatgagggaggccaacttcaccgtttcc
tccatgcatggagacatgccccagaaggagagggagtccatcatgaaagagttccgttcc
ggtgccagccgagtgcttatctcaactgatgtgtgggcccgaggtctggatgtgccccag
gtgtccctcatcatcaactacgacctgcccaacaacagagagctgtacatccacaggatt
ggccgatcgggtcgttacggccgcaagggtgtggccatcaactttgtgaagaacgacgac
atccgtattctccgtgacattgagcagtactattccacacagatcgatgaaatgccaatg
aacgtggctgacctgatctaa
DBGET
integrated database retrieval system
