Oncorhynchus mykiss (rainbow trout): 110493814
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Entry
110493814 CDS
T07259
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110493814
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110493814
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110493814
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110493814
Intermediate filaments
Intermediate filament-binding proteins
110493814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
110493814
NCBI-ProteinID:
XP_021423989
Ensembl:
ENSOMYG00000044468
LinkDB
All DBs
Position
17:complement(35517752..35605275)
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEYEHMEITQQYSSSDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSDESGKDLTGAVRLLSKHRTLEDEMNGRAGHLQHTIAEGQAMADGGHFGAAKIRDR
IADLRAQWAALEELAGVRKAHLEEACALHQFQADADDADAWTLDALRIVSSSEVGHDEFS
TQALVRKHKDAAAEVASYRPVIDALHEQAAALPEEQAQSEEVKGRLAGIEERYKEVAELT
RLRKQALQDALALYKMFSEADACEVWIDEKDQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKDIKAQQDKLNNRWSQFRDLADQKKESLISALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AERLAGEHPDQAKAITGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAIASEETPNTLAEAEKLLAQHDGIKNEICNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEVFLNNQEYMLAHTEMP
TTLEGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINADRIQERATSIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVE
LQSQALVLSQEGKDTGEVDGQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VEAIRQRLADLQLLWGLMIEETEKRHVRLEEAHNAQKYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHPESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILSRILDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLEACDGRRVHLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLA
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPLPEQDSPLQIGVENGLQNGLPSDQDSPQNGVDRVEIMNGVAEQNSKDPSPIPSP
TASRRGKGSLSSTLPTQNQDLPAAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEM
GFYKDNKAAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVTDGNEYLFQAKEEEE
MSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPATVTLTSESSPGKREKDKEKDKEK
RFSLFGKKKL
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtggccgcggaatatgagcacatggagatcacgcagcagtacagcagcagc
gacacggtcaacaaccgctgggatgatgagtgggacaacgagaacagctcagctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagcggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcaccgacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggacggatgcgtatccactgcctggagaacgtggacaaggct
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacacgacattgtt
gacggcaaccaccgcctcaccctggggctcatctggaccatcattctcaggttccagatc
caggacatcagtgttgagactgacggagacaacaaggagaagagatcagccaaggacgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaatttc
agcaccagttggcgagacggcatggctttcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtccaatgcccaccacaacctgcagaatgccttc
aatctggctgagcagcatcttgggcttaccaagctcctagacccagaggatatcagtgtg
gaccaccccgatgagaagtcggtcatcacatacgtggtgacgtactaccactacttctcc
aaaatgaaggcgctgaaagtggaggggaaacgtattgggaaggtactggacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggtcgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggccaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggagaga
ctggagaaggcggagcatgagcgggagctggctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggctg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgaccttccggcggtggac
gcggccaccaagaagcatgaggccatcgagacggatattacggcgtacgaggagcgtgtg
caggccgtggtgtctgtcgctaaggagctggaggcagagaagtaccatgacatcaaacgc
atcacagcgcgcaaggacaacgtgatccggctgtgggagtacctgctggagcttctgaag
gcgaggcgccagcgcctggagatgaatctgggtctgcagagggtcttccaggagatgctt
tacatcatggactggatggacgagatgaagatgatgctgctgtcccaggactatgggaag
catctgctcggagtggaggatctcctgcagaaacatgccctggtagaggccgacatcggc
atccaggctgaccgtgtgaaagctgtcaacaacaatgcccagaaattcgccatcgacggc
gacgtttacaagccctgtgaccctcaggtaatacgcgaccgcgtggcccacatggagttc
tgctaccaggagctgacccagctcgctgccgagcgccgggcccgcctggaggagtcccgt
cgtctctggaagttcttctgggagatggccgaggaggagggctggatccgtgagaaggag
cagatcctgtcgtcggacgagagcggcaaggacctgacgggggctgtgcgcctgttaagc
aagcaccgcaccctggaggacgagatgaatggccgtgccggtcacctgcagcacaccatc
gccgagggccaggccatggccgacggtggccacttcggcgccgccaagatccgcgaccgc
atcgccgacctgcgggcgcagtgggcagcattggaggagctagcgggcgtgaggaaggcc
catctggaggaagcgtgtgccctgcaccagttccaggcggacgcagacgatgccgacgcc
tggaccctggatgccctgcgcatcgtgtccagcagcgaggtgggccatgacgagttctcc
acacaggccctggtgcgcaagcacaaggacgccgccgccgaggtggccagctatcggccg
gtgatcgatgcactccatgagcaggcggccgccttgcctgaggagcaggctcagtcggaa
gaggtcaagggccgcctggcaggcatagaggagcgctacaaggaggtggccgagctgacc
cggctgagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgaggtgtggattgatgagaaggatcagtggctcaacagcatggagatccca
gagaagctagaagacctagaggtcattcagcacaggttcgagagcctggagcctgagatg
aacaaccaggcgtcacgcgtcgctgtcgtgaaccagattgccaggcagctgatgcacaac
ggacaccccagtgagaaggacataaaagcccagcaagataagctcaataacagatggagc
cagttccgggatctggcggaccagaagaaggagtctctaatctccgcgctgggtgtgcag
aactaccacctggactgcaacgaaaccaagtcgtggatccgcgagaagacaaaggtcatc
gagtccacccaggagctgggcaacgacctgacgggtgtcatggcgctgcagcgcaaactc
actggcatggagcgtgacctggctgccatcgaggacaagctgggcgacctgcgcggcgag
gccgagcggctggccggcgagcacccagaccaggccaaggccatcacgggccgcctggcc
gagatcaccgctgtgtgggaggagatgaaggccacactgcgtaaccgcgaagagtccctt
ggcgaggccagcaagctgcagcagttcctgcgcgaactggatgacttccagtcgtggctg
tcgcgcacacagacagccatcgcctcggaggagacgcccaacacgctggctgaggcagag
aagctgctagcacagcacgacggcatcaaaaacgagatctgcaactacgaggaggactac
cagaagatgcgcgacatgggcgagatggtgacccagggtcagaccgatgcccagtacatg
ttcctgaggcagcggctacaggcactggacacaggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgtcacagtcccacgcctaccagctgtttctcagggacacc
aagcaggccgaggtcttcctcaacaaccaggaatacatgctggcccatacagagatgccc
actacgcttgagggggccgaaggagccatcaagaagcaggaggacttcatgaccaccatg
gacgccaacgaagagaagataaacggcgtggtggaggctggcaggcggctggcgagcgac
ggcaacatcaatgccgaccgcatccaggagagagcgacgtctattgacgacaggcataag
aagaaccgcgaggctgctgtggagctactgatgaggctgaaggataaccgggaccttcag
aagttcctacaggattgccaggagctgtctctgtggatcaatgagaagatgctcacggcc
caggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggccgagttgcagtccaacaaggagtggctggacaagattgagaaggatgggatg
cagctggtgttggagaagcctgagacagagtcggtggtcaaggagaagctctcagccctc
cagaagatgtgggaagagttggagtccaccacccagaccaaggcccagtgcctgtttgac
gccaacaaggccgagctgtttacacagagctgtgccgacctggacaagtggctgggtggc
ctggagggccagattcaatcggacgactacggcaaagacctgaccagcgtcaacatcctg
ctcaagaagcagcagatattggaaaaccaggtggaggtccgtcagagggaggtggtggag
ctgcagagccaggcgctggtcctcagccaggaagggaaggacacgggggaggtggatggc
cagagacaaatggtggagcacaagttcaaagagctgctggacccgctgaggaagagaaag
aacttcctggtggcctcccgcgagatccaccagttcaaccgtgatgtggaggacgagatt
ctttgggtcgaagagaggatgccaattgcaacctccacggatcatggtcacaacctgcag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgatgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
gtggaggccatccgccagcgcctggccgacttgcaactgctgtggggcctgatgattgag
gagacggagaagcgtcacgtccgactggaggaggcccacaatgcacagaagtactacttt
gatgccgccgaggcagaggcctggatgagcgagcaggagttgtacatgatgtctgaggag
aaggccaaggatgagcagagctccgtagccatgctgaagaagcaccagattgtggagcag
tcggtggaggactacgctgagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatccagagagtgagaggataggcatgcgtcagtctcaggtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggcggggcaaactggatgagcggttccgc
ctgttccagctcaaccgcgaggttgacgacttggagcagtggattgccgagcgggaggtg
gtggccggatctcatgagctgggacaggactacgagcatgtcaccatgctacaggagcgc
ttccgggagtttgcgcgcgacacaggcaatatcggccaggagcgtgtggatgccgtcaac
cgcctggccgatgagctgataaatgcgggccacgcagatgccgccacggtggccgagtgg
aaagatggactcaacgaggcctgggctgacctgctggaacttatagacacgcgcacgcag
atcctggccgcctcctacgagctgcacaagttctaccatgacgccaaggagatcctgagc
cgcatcctggacaaacacaagaaacttccagaggaggtgggacgtgaccagaacacagtg
gagacactgcagaggatgcacaccaccttcgagcatgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcggcctatgccggcgacaaggca
gacgacatccagcggagggagagcgaggtgctggaggcctggaataccctgctggaggcc
tgcgatggccgcagggtccacctcctggacacgggcgacaaattccgcttcttcagcatg
gtgcgcgacctcatgctgtggatggaggacgtcatccgtctcatcgaagcccaggagaat
ccaagggacgtgtcctcggtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgacgcccgcaatgacagcttcaccgcctgcattgagttgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaagataagttactacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaagtt
caccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctattcggccgggagttggggcagagcgtggacgaggtggagaaactgatcaagaggcac
gaggcattcgagaagtcggccgccacttgggaggaacgcttctcagcactggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaagaaagaatgcgaaaa
cccccttcgccagagcctttaccggagcaagactcaccactgcagattggagtagagaac
ggactgcagaatggactgccctcagaccaggattccccacagaatggtgtggacagagtt
gagatcatgaatggagtggcggagcagaactcaaaggaccccagccccattccctcaccc
acagccagccggcggggcaagggcagcctgtcctccacattgccgacccagaaccaggat
ttgcctgcagctcagctggagggcttcctgcatcgcaagcatgagtgggagggtcacaac
aagaaggcctcaagcagatcctggcataacgtgtactgcgttatcaacaatcaggaaatg
ggcttctacaaagacaacaaggctgctggtcaaggcatcccctaccacaatgcgattccg
atcagtctaatgggggctgtgtgtgatgtggccatggattacaaaaaaaagaagcatgtc
ttcaaactcagagttacggatggaaatgagtatctcttccaagccaaagaagaagaggag
atgagcacatggatccaggccattctgaatgcggggacacctgacaaggtatcgattacg
cccagcaaccagagcactccggcgtcaagccgagcccagaccctgcccgccaccgtcacc
ctcaccagcgaatccagcccgggcaagcgggagaaagacaaggagaaggacaaggagaag
cgattcagcctgttcggcaagaaaaaactataa
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integrated database retrieval system
